User: Johannes Hanson

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New User
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Last seen:
9 years ago
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10 years, 4 months ago
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s*********@uu.nl

Posts by Johannes Hanson

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topGO and Arabidopsis data
... Dear All, I am analyzing affymetrix expression data using the topGO package. I basically follow the script in the topGO vingette. It works fine for the CC and BP ontologies but for MF i get the following error: > sampleGOdata <- new("topGOdata", description = "Simple session", ontology = "MF ...
annotation go ath1121501 topgo written 9.0 years ago by Johannes Hanson30 • updated 9.0 years ago by Adrian Alexa400
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How to compare GO results
... Dear Alex and other list members, The suggested script works nicely. However I get another problem when I using two specific lists of genes. The lists compare fine with all other lists but not with each other. I get the error only when I use onto='CC' or 'BP', but not 'MF'. Suggestions are most wel ...
annotation go topgo goprofiles written 10.3 years ago by Johannes Hanson30
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How to compare GO results
... Dear all, This might not be a specific BioConductor question. However, BioConductor is my major tool and therefore I ask the question here. If not appropriate please ignore. I am analyzing array data from a set of mutants all showing the same phenotype. The idea was of course to find genes similar ...
go topgo written 10.3 years ago by Johannes Hanson30 • updated 10.3 years ago by Alex Sanchez90

Latest awards to Johannes Hanson

Popular Question 9.0 years ago, created a question with more than 1,000 views. For topGO and Arabidopsis data

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