User: Unger, Kristian

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40
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New User
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Last seen:
9 years, 1 month ago
Joined:
10 years, 5 months ago
Email:
k******@imperial.ac.uk

Posts by Unger, Kristian

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Comment: C: Fwd: KEGGgraph / Rgraphviz dot layout
... Thank you very much David! Following your hint I learned to set the attributes using the following code: nA <- makeNodeAttrs(mapkG, label=nodesNames, fixedsize=F, width=20, height=20, font=20, fontsize=20) plot(mapkG, "dot", nodeAttrs=nA) Unfortunately, changing he height/width or fontsize (a ...
written 9.1 years ago by Unger, Kristian40
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Fwd: KEGGgraph / Rgraphviz dot layout
... Hi there I am trying to optimise an output of pathway analysis and I am halfway successful doing this using KEGGgraph. The most useful layout for my purposes is the "dot" layout. The only problem I have is that I cannot change the layout parameters for the nodes such as 'width', 'height' or anythin ...
kegggraph written 9.1 years ago by Unger, Kristian40 • updated 9.1 years ago by Jitao David Zhang340
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Combine affy ExpressionSets
... Hi there! I would like to combine different Affymetrix ExpressionSets. Firstly I want to combine the esets of U133A and U133B chips from the samples. And if possible to do this I would like to combine that data set with data generated from U133Plus2 chips. Is there a way to do this? Best wishes ...
written 10.0 years ago by Unger, Kristian40 • updated 10.0 years ago by Wolfgang Huber13k
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bioMart error when accessing database
... Hi there! When I try to access the functional genomics database/hsapiens_feature_set by using ensembl = useMart("functional_genomics") I get the following error: > ensembl = useDataset("hsapiens_feature_set",mart=ensembl) Checking attributes and filters ...Error in if (!is.null(displayType) ...
written 10.4 years ago by Unger, Kristian40 • updated 10.4 years ago by Rhoda Kinsella660

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