User: Stephen Nyangoma

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Posts by Stephen Nyangoma

<prev • 23 results • page 1 of 3 • next >
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Answer: A: Loading a file.tar.gz into R
... I actually want to install this into R for Linux. Sorry for inadequate information. Stephen. On Thu, 2004-05-06 at 19:39, James MacDonald wrote: > You have given so little information that it is impossible for anybody > to help. Please at least give us the operating system, and exactly what ...
written 15.5 years ago by Stephen Nyangoma230
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Loading a file.tar.gz into R
... Hi I have a file.tar.gz and would like to load it into R so that I can use it. Please give me tips. Stephen. ...
written 15.5 years ago by Stephen Nyangoma230
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package hgu95av2cdf for R 1.9.0
... Hi Where can I get cdf files for R 1.9.0? Thanks. Steve. ...
cdf written 15.5 years ago by Stephen Nyangoma230 • updated 15.5 years ago by James W. MacDonald51k
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Irizarry's paper on Stochastic Models - R-codes
... Does anyone know where to get R-Codes for Irizarry's Stochastic models paper? Thanks Stephen. ...
written 15.5 years ago by Stephen Nyangoma230
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Answer: A: Re: suggestions of books
... Sorry for bothering you with this question. Has someone analylsed LC-MS data? How do you read this data into R? Are there preprocessing tools in R? What are the crusial preprocessing steps? Do the ascii files obtained from Brucker software contain raw files? Thanks. Stephen. On Thu, 2004-03-1 ...
written 15.6 years ago by Stephen Nyangoma230
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IMAGE PLOTS.
... Hi all, I am doing image plots of affy chips but cannot get a good refference for interpretations. I have read the manual but all it says is that you can examine the quality of the intensities from it. It does not explain what is plotted, for example. Does the image plot depict both PM and MMMs or j ...
affy written 15.8 years ago by Stephen Nyangoma230 • updated 15.8 years ago by Laurent Gautier2.2k
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Comment: C: PDNN for affy.
... Thanks, Laurent for a quick reply. Stephen. On Mon, 2003-10-13 at 10:36, Laurent Gautier wrote: > Hi Stephen, > > Note that the pack 'affypdnn' was developped under R-1.7.1, > but it should work out-of-the-box with R-1.8.0 and/or > the latest devel version of 'affy'. > > I sh ...
written 16.0 years ago by Stephen Nyangoma230
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PDNN for affy.
... Hi all, I am implementing the R for PDNN model by Laurent in R-1.7.1. The function find.params.pdnn works ok and I can obtain the Bs, Ns, Fs and the lambdas. I want to use equation 1 in the paper Li Zhang, Michael F. Miles and Kenneth D. Aldape - A model of molecular interactions on short oligonucl ...
written 16.0 years ago by Stephen Nyangoma230 • updated 16.0 years ago by Laurent Gautier2.2k
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Partitioning main effects.
... Hi all, I am doing analysis of variance. Suppose y is an observed probe intensity value then a main effects model is y = Array + probe + error Suppose there is information about the locations of probes relative to 3' end and suppose the distances from 3' fall in 2 categories (X,Y). I am searching ...
probe written 16.0 years ago by Stephen Nyangoma230
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Answer: A: affy devel fails to install with getBioC and Rbeta1.8.0
... Hi all, Is there a simple way in Bioconductor to screen the genes so that one considers only "well expressed" genes? Thanks. Steve. On Thu, 2003-10-02 at 15:52, James MacDonald wrote: > It's probably not on your end. I don't think affy 1.3.14 and R-1.8.0 are > fully compatible yet. R-1.8.0 ...
written 16.1 years ago by Stephen Nyangoma230

Latest awards to Stephen Nyangoma

Popular Question 15.5 years ago, created a question with more than 1,000 views. For Loading a file.tar.gz into R

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