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Comment: C: looping through a GRangesList object
8.3 years ago Simon Anders ★ 3.7k
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4.2k
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Comment: C: lopping through a GRangesList object
8.3 years ago Simon Anders ★ 3.7k
0
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0
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2.1k
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Comment: C: How to find the differentially expressed genes for paired tumor normal samples w
8.4 years ago Simon Anders ★ 3.7k
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1
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2.1k
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Comment: C: How to find the differentially expressed genes for paired tumor normal samples w
8.4 years ago Simon Anders ★ 3.7k
3
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7.8k
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Comment: C: Normalization methodology in DESeq/DESeq2 vs edgeR
8.5 years ago Simon Anders ★ 3.7k
1
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0
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7.8k
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Comment: C: Normalization methodology in DESeq/DESeq2 vs edgeR
8.5 years ago Simon Anders ★ 3.7k
0
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0
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7.8k
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Comment: C: Normalization methodology in DESeq/DESeq2 vs edgeR
8.5 years ago Simon Anders ★ 3.7k
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3.5k
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Comment: C: about DEseq for spike-in datasets
8.7 years ago Simon Anders ★ 3.7k
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9.5k
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Comment: C: DESeq2: Starting from count tables
8.8 years ago Simon Anders ★ 3.7k
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2
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2.0k
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Comment: C: Check DESeq2 contrasts for exon vs intron changes
8.8 years ago Simon Anders ★ 3.7k
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1
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4.4k
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Comment: C: DESeq2: Compare expression of one group to the mean of others
8.9 years ago Simon Anders ★ 3.7k
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0
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4.5k
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Comment: C: Deseq2: How to adjust for baseline read counts when testing for groups differenc
9.0 years ago Simon Anders ★ 3.7k
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0
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2.9k
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Comment: C: Help with DESeq2 Multiple Factor Design
9.1 years ago Simon Anders ★ 3.7k
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4.2k
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Comment: C: deseq: all padj values equal to 1
9.3 years ago Simon Anders ★ 3.7k
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1
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1.4k
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Comment: C: Implementation of SAM statistical technique in R
9.3 years ago Simon Anders ★ 3.7k
1
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7.3k
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Comment: C: DESeq2 rlog transformation
9.4 years ago Simon Anders ★ 3.7k
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0
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1.4k
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Comment: C: DEXSeq error: Count files do not correspond to the flattened annotation file
9.5 years ago Simon Anders ★ 3.7k
0
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1
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1.5k
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Comment: C: DESeq Dispersion Estimation for Classification Purpose
9.5 years ago Simon Anders ★ 3.7k
0
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1
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24k
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Comment: C: DEseq2 time-series design.
9.5 years ago Simon Anders ★ 3.7k
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1
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9.3k
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Comment: C: DESeq2 timecourse - How to set the experimental design
9.6 years ago Simon Anders ★ 3.7k
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0
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6.7k
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Comment: C: DESeq2: removing levels from a factor or not having them in the analysis at all
9.6 years ago Simon Anders ★ 3.7k
0
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2
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4.1k
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Comment: C: DESeq2: making specific comparisons between samples that have two conditions and
9.6 years ago Simon Anders ★ 3.7k
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1
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1.0k
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Comment: C: Documentation for FeatureDB class?
9.6 years ago Simon Anders ★ 3.7k
0
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0
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2.3k
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Comment: C: IlluminaHumanMethylation450k.db has undeclared dependency on AnnotationForge
9.6 years ago Simon Anders ★ 3.7k
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0
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4.1k
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Comment: C: multiple level factors contrast in nbinomLRT, DESeq2.
9.7 years ago Simon Anders ★ 3.7k
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1
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1.3k
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Comment: C: DEXSeq- fitDispersionFunction error
9.8 years ago Simon Anders ★ 3.7k
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1
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2.8k
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Comment: C: Expected number of DE genes?
9.8 years ago Simon Anders ★ 3.7k
0
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1
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2.2k
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Comment: C: makeTranscriptDbFromGFF Error for UCSC GTF File
9.8 years ago Simon Anders ★ 3.7k
0
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1
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11k
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Comment: C: DESeq2: up- and down-regulated genes
9.9 years ago Simon Anders ★ 3.7k
0
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0
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1.9k
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Comment: C: DESeq2 - precisions about interaction and fold change calculation
9.9 years ago Simon Anders ★ 3.7k
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0
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3.8k
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Comment: C: DESeq vs DESeq2 have different DEGs results
10.0 years ago Simon Anders ★ 3.7k
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0
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1.5k
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Comment: C: DESeq on CCAT identified chipseq peaks
10.0 years ago Simon Anders ★ 3.7k
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0
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15k
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Comment: C: DESeq2: Paired Test
10.1 years ago Simon Anders ★ 3.7k
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0
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2.4k
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Comment: C: Low number of replicates DESeq
10.2 years ago Simon Anders ★ 3.7k
0
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1
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1.4k
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Comment: C: DEXSeq - identical p-values for all exons in a gene
10.3 years ago Simon Anders ★ 3.7k
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0
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4.7k
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Comment: C: DEseq2 metagenomic analysis without replicates
10.3 years ago Simon Anders ★ 3.7k
0
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0
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1.4k
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Comment: C: DEXSeq - identical p-values for all exons in a gene
10.3 years ago Simon Anders ★ 3.7k
0
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0
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1.4k
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Comment: C: DEXSeq - identical p-values for all exons in a gene
10.3 years ago Simon Anders ★ 3.7k
0
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1
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4.7k
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Comment: C: DEseq2 metagenomic analysis without replicates
10.3 years ago Simon Anders ★ 3.7k
0
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1
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4.7k
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Comment: C: DEseq2 metagenomic analysis without replicates
10.3 years ago Simon Anders ★ 3.7k
0
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1
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4.7k
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Comment: C: DEseq2 metagenomic analysis without replicates
10.3 years ago Simon Anders ★ 3.7k
0
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1
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3.2k
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Comment: C: DESeq2 high fold change values for comparison of samples with zero counts
10.3 years ago Simon Anders ★ 3.7k
0
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1
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4.4k
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Comment: C: DESeq / DESeq2 for translation efficiency in polysome profiling or ribsome profi
10.4 years ago Simon Anders ★ 3.7k
0
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1
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4.4k
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Comment: C: DESeq / DESeq2 for translation efficiency in polysome profiling or ribsome profi
10.4 years ago Simon Anders ★ 3.7k
0
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1
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1.8k
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Comment: C: Dexseq package: dexseq_count error message and warnings
10.5 years ago Simon Anders ★ 3.7k
0
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0
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6.3k
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Comment: C: Too many (?) differentially expressed genes - edgeR and DESeq
10.8 years ago Simon Anders ★ 3.7k
0
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0
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2.3k
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Comment: C: RNAseq machine learning classifier
10.8 years ago Simon Anders ★ 3.7k
0
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0
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872
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Comment: C: DEXSEq warning when using TRT functions
10.8 years ago Simon Anders ★ 3.7k
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1
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2.1k
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Comment: C: htseq and dexseq
10.9 years ago Simon Anders ★ 3.7k
0
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0
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1.1k
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Comment: C: What is a good "control" for bacteria RNA-seq samples from a series of time poin
10.9 years ago Simon Anders ★ 3.7k
169 results • Page 2 of 4
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