User: Erik van den Akker

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5 years, 4 months ago
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8 years, 4 months ago
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e**************@gmail.com

Posts by Erik van den Akker

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Comment: C: Failed to obtain \'hguid\' cookie for UCSC browser session
... Dear all, I was thinking along the same lines as Dan. I've run some code of rtracklayer and have some more detailed information that might be useful for debugging, since this indeed seems to be a european problem. When initializing a new instance of "UCSCSession" (when invoking method browserSessi ...
written 5.4 years ago by Erik van den Akker50
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Comment: C: GenomicFeatures: makeTranscriptDbFromUCSC on "refGene" supported?
... Wow! Impressive reaction time! Thanks for this quick fix! Cheerz, Erik 2010/7/15 Hervé Pagès > This is fixed in GenomicFeatures release (1.0.5) and devel > (1.1.6). Both should become available via biocLite() in the > next 24 or 36 hours. > > Thanks again for the report. > > ...
written 8.3 years ago by Erik van den Akker50
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Comment: C: GenomicFeatures: makeTranscriptDbFromUCSC on "refGene" supported?
... Hi Vince & Hervé, I'm afraid i've run into another (small) problem with using the GenomicFeatures package: For the sake of clarity, I've used the example as described in the vignette again for making a TranscriptDb object: > library(GenomicFeatures) > mm9KG <- makeTranscriptDbFromUC ...
written 8.3 years ago by Erik van den Akker50
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GenomicFeatures makeTranscriptDbFromUCSC on refGene supported?
... Hi all, I'm a PhD student in bioinformatics working at the Leiden University Medical Center and at the Delft University of Technology in the Netherlands. Currently I'm working on the visualization of genome wide data sources, such as Linkage, GWAS & Expression data. In order to be able to quic ...
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GenomicFeatures: makeTranscriptDbFromUCSC on "refGene" supported?
... Hi all, I'm a PhD student in bioinformatics working at the Leiden University Medical Center and at the Delft University of Technlogy in the Netherlands. Currently I'm working on the vizualization of genome wide data sources, such as Linkage, GWAS & Expression data. In order to be able to quick ...
rtracklayer genomicfeatures written 8.3 years ago by Erik van den Akker50 • updated 8.3 years ago by Vincent J. Carey, Jr.6.2k

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