User: Samantha England

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8 years, 10 months ago
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8 years, 11 months ago
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s****@cam.ac.uk

Posts by Samantha England

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Agi4x44PreProcess: Replicated Genes and Custom Annotation Database
... To the Bioconductor Community To the "Agi4x44PreProcess" Package Author/Maintainer: Pedro Lopez- Romero Dear All, I wrote for your advice last week concerning a problem I was experiencing using the "genes.rpt.agi" function in "Agi4x44PreProcess". We are using custom-designed Agilent 4x44 array ...
annotation zebrafish probe decipher written 8.9 years ago by Samantha England40 • updated 8.9 years ago by Marc Carlson7.2k
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Agi4x44PreProcess - Replicated Genes Error
... To the Bioconductor Community Dear All, Thanks to your tremendous help I have successfully been able to design my own custom annotation pack (for our custom Agilent chips) and carry out every other function of the Agi4x44PreProcess package. My custom annotation database works perfectly for the re ...
annotation probe agi4x44preprocess written 8.9 years ago by Samantha England40 • updated 8.9 years ago by Georg Otto120
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Error in Heatmap: Could not find function "heatmap.2"
... To the Bioconductor Community Dear All, Firstly I would like to thank you all for the excellent advice that you have given me as I process my single-colour Agilent data using the R package "Agi4x44PreProcess". I am trying to build the expression set, and would like to plot a heatmap showing the 1 ...
process marray written 8.9 years ago by Samantha England40 • updated 8.9 years ago by Benjamin Otto830
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Annotation in Agi4x44PreProcess
... To the Maintainers of "Agi4x44PreProcess" and the Bioconductor community We are using custom-designed Agilent chips (4 x 45220 probe) to analyse one-colour samples prepared from zebrafish embryos. The question I have concerns the use of annotation databases in "Agi4x44PreProcess". The raw text fi ...
annotation zebrafish probe agi4x44preprocess written 8.9 years ago by Samantha England40 • updated 8.9 years ago by Marc Carlson7.2k

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