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Showing :
answers
3
votes
1
reply
1.3k
views
Answer:
A: AnnotationHub: two broad peaks from same url are not the same
7.4 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.4k
views
Answer:
A: Annotation Hub object no longer present
7.5 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.4k
views
Answer:
A: Problem with VariantAnnotation and VCF "R" genotype fields when expanding Collap
7.5 years ago
Valerie Obenchain
★ 6.8k
3
votes
0
replies
1.2k
views
Answer:
A: Annotatr package not loading certain features
7.5 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.3k
views
Answer:
A: Error in installing flowCore package R
7.5 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.6k
views
Answer:
A: Additions to AnnotationHub (for example, CpG islands for hg38 and mm10)
7.5 years ago
Valerie Obenchain
★ 6.8k
3
votes
1
reply
3.1k
views
Answer:
A: keepSeqlevels for GRangesList: drop elements with multiple seqnames
7.5 years ago
Valerie Obenchain
★ 6.8k
2
votes
1
reply
726
views
Answer:
A: Class for Storing Chimeric Reads
7.5 years ago
Valerie Obenchain
★ 6.8k
2
votes
0
replies
1.2k
views
Answer:
A: ExperimentHub - Error: database is corrupt
7.5 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.6k
views
Answer:
A: Is reactome.db still updated?
7.6 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.1k
views
Answer:
A: error with downloading AnnotationHub item AH134
7.6 years ago
Valerie Obenchain
★ 6.8k
4
votes
1
reply
2.6k
views
Answer:
A: Copying Amazon Bioconductor AMI to another zone
7.6 years ago
Valerie Obenchain
★ 6.8k
2
votes
1
reply
1.6k
views
Answer:
A: AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
7.6 years ago
Valerie Obenchain
★ 6.8k
1
vote
2
replies
1.2k
views
Answer:
A: How to remove duplicated overlap hit index in IntegerList efficiently ?
7.6 years ago
Valerie Obenchain
★ 6.8k
1
vote
1
reply
1.2k
views
Answer:
A: problems with GenomicFeatures::supportedUCSCtables("hg38")
7.6 years ago
Valerie Obenchain
★ 6.8k
6
votes
1
reply
35k
views
Answer:
A: How to map all Ensembl IDs to Gene Symbols- Problem with AnootationDbi
7.6 years ago
Valerie Obenchain
★ 6.8k
1
vote
0
replies
1.5k
views
Answer:
A: predictCoding fails with error
7.6 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.5k
views
Answer:
A: New functions to UniProt.ws
7.6 years ago
Valerie Obenchain
★ 6.8k
1
vote
1
reply
1.3k
views
Answer:
A: Why No Uniprot information for some other organisms in AnnotationHub?
7.7 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.5k
views
Answer:
A: AnnotationHub's NCBI OrgDB have older EGSOURCEDATE than org.Xy.eg.db?
7.7 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.9k
views
Answer:
A: DistanceToNearest() error: 'nLnode' and 'nRnode' must be single integers
7.7 years ago
Valerie Obenchain
★ 6.8k
2
votes
1
reply
1.6k
views
Answer:
A: AnnotationHub and ExperimentHub make "~" directory in my home
7.7 years ago
Valerie Obenchain
★ 6.8k
3
votes
1
reply
1.6k
views
Answer:
A: Genomic features for genomic positions
7.8 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.3k
views
Answer:
A: Problem with summarizeVariants function (VariantAnnotation) when using a multi-s
7.8 years ago
Valerie Obenchain
★ 6.8k
3
votes
1
reply
1.5k
views
Answer:
A: Keep original range by using flank() on a GRanges object.
7.8 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
879
views
Answer:
A: Error in updating metadata to local database in AnnotationHub
7.8 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
890
views
Answer:
A: VariantAnnotation print malformated vcf
7.8 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.6k
views
Answer:
A: How to launch a preconfigured Bioconductor AMI session using the free tier with
7.9 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.7k
views
Answer:
A: makeOrgPackageFromNCBI for non model species -> eror in file
7.9 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.5k
views
Answer:
A: Getting "error: database is corrupt" when using ExperimentHub()
7.9 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.1k
views
Answer:
A: vcf to vranges
7.9 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.8k
views
Answer:
A: can't install workflow "rnaseqGene" with Bioconductor version3.3
7.9 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
813
views
Answer:
A: Asking for dataset Chronic Lymphocytic Leukemia
7.9 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.3k
views
Answer:
A: Broken AnnotationHub resource (AH21414 | grasp2)
8.0 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.1k
views
Answer:
A: Error in makeOrganismDbFromBiomart call for Heliconius melpomene (Ensembl Metazo
8.0 years ago
Valerie Obenchain
★ 6.8k
2
votes
1
reply
1.3k
views
Answer:
A: distinguish DataSource from Provider and ProviderVersion in makeTxDbPackage
8.0 years ago
Valerie Obenchain
★ 6.8k
2
votes
0
replies
1.3k
views
Answer:
A: AnnotationHub: confusing pValue/qValue for (some) Roadmap records
8.1 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.1k
views
Answer:
A: VariantAnnotation dbSNPs strand
8.1 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.3k
views
Answer:
A: Genome versions of the VcfFiles from AnnotationHub
8.1 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.4k
views
Answer:
A: mapFromTranscripts strand problem
8.1 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.6k
views
Answer:
A: Duplicated rows in readVcf output
8.1 years ago
Valerie Obenchain
★ 6.8k
0
votes
3
replies
1.7k
views
Answer:
A: VariantAnnotation produces duplicate names
8.1 years ago
Valerie Obenchain
★ 6.8k
1
vote
2
replies
2.0k
views
Answer:
A: Why does Homo.sapiens import TxDb.Hsapiens.UCSC.hg19.knownGene instead of TxDb.H
8.1 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
1.3k
views
Answer:
A: Differential gene expression analysis for GSE62944
8.1 years ago
Valerie Obenchain
★ 6.8k
2
votes
1
reply
1.4k
views
Answer:
A: Broken AnnotationHub resource (AH25517 | wgEncodeOpenChromDnaseGm12878Pk.narrowP
8.2 years ago
Valerie Obenchain
★ 6.8k
1
vote
1
reply
1.7k
views
Answer:
A: SummarizeOverlaps without reference genome ?
8.2 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.8k
views
Answer:
A: Gene symbol annotation not converted for intergenic SNPs with multiple genes
8.2 years ago
Valerie Obenchain
★ 6.8k
2
votes
1
reply
1.7k
views
Answer:
A: filterVcf by sample id
8.2 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
1.4k
views
Answer:
A: AnnotationHub() returns only one record !?
8.2 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
2.1k
views
Answer:
A: Minimum overlap for summarizeOverlaps() to call hit
8.2 years ago
Valerie Obenchain
★ 6.8k
379 results • Page
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