User: dha 2001

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dha 200130
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Posts by dha 2001

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Comment: C: Problem creating expression set.
... Thanks. That seemed to do it. That behavior is highly unexpected, at least to me. On Tue, May 1, 2012 at 10:35 AM, James W. MacDonald wrote: > You need to have consistent ordering between your phenoData and expression > matrix. > > Best, > > Jim > > > > > On 5/1/ ...
written 7.5 years ago by dha 200130
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Problem creating expression set.
... Hi, I'm trying to create a small expression set from the following pieces of data: > is.matrix(sdr) [1] TRUE > sdr PR8.16 PR8.12 X31.12 PR8.24 VN.24 VN.12 1600014C10Rik 0.1398317 -0.07606908 0.1183433 0.8794916 0.5701783 0.2045793 1700123I01Rik 0.2797059 0 ...
written 7.5 years ago by dha 200130 • updated 7.5 years ago by James W. MacDonald51k
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"timecourse" package, problem with ordering of samples.
... Hi, I'm trying to analyze a time series experiment consisting of 2 conditions (stimulated and mock) with three time points (12,16, 24 hours) with 3 replicates at each condition. Although I am specifying the time points, groups, and conditions explicitly, the "plotProfile" function does not seem to ...
assign written 8.1 years ago by dha 200130

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