User: Amit Kumar Kashyap

Reputation:
50
Status:
New User
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Last seen:
7 years, 1 month ago
Joined:
7 years, 6 months ago
Email:
a************@gmail.com

Posts by Amit Kumar Kashyap

<prev • 5 results • page 1 of 1 • next >
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entrez gene summary
... Hello All , I have a list of genes (HUGO gene symbols ) or Entrez IDs . I would like to get the entrez gene summaries for those genes. Does any one know if there is R package exits by which I get obtain entrez gene summary. e.g http://www.ncbi.nlm.nih.gov/gene/1 I would like to extract summary pa ...
written 7.1 years ago by Amit Kumar Kashyap50 • updated 7.1 years ago by David Westergaard280
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Comment: C: Kegg pathways overlay with log fold change values
... Hello , Thank you very much , I will look in these links . Kind Regards -Amit Kumar On Mon, Jun 11, 2012 at 2:42 PM, Paul Shannon wrote: > With RCytoscape > > http://bioconductor.org/packages/2.10/bioc/html/RCytoscape.html > > http://db.systemsbiology.net:8080/cytoscape/RCytosc ...
written 7.3 years ago by Amit Kumar Kashyap50
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Kegg pathways overlay with log fold change values
... Hello all, does anyone knows how we can overlay expression data { coloring with up and down genes } in pathways using R package or any other script. Especially the results from SPIA package , we get the kegg link like this ... http://www.genome.jp/dbget-bin/show_pathway?hsa05200+999+22798+3915+ ...
pathways limma spia written 7.3 years ago by Amit Kumar Kashyap50 • updated 7.3 years ago by alessandro brozzi120
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Comment: C: Please help : RGraphviz installation problem version 1.32 in Ubuntu and Windows
... Hello Steve , Thanks for the information . It was helpful to read to README ..I followed the instructions in README but still unsuccessful to run it RGraphviz . it says program can't start because MSVCR80.dll is missing from your computer.. I am using windows7 and Latest R version 14.2 Thank ...
written 7.5 years ago by Amit Kumar Kashyap50
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Please help : RGraphviz installation problem version 1.32 in Ubuntu and Windows 7
... hello All , I was trying to install RGrphaviz packge in R from : http://www.bioconductor.org/packages/release/bioc/html/Rgraphviz.html but could not successfully either in Linux or windows In windows it says : *The program can not start because libctd-4.dll missing * * * In Linnux (Ubuntu 11 .10 ) ...
written 7.5 years ago by Amit Kumar Kashyap50 • updated 7.5 years ago by Steve Lianoglou12k

Latest awards to Amit Kumar Kashyap

Popular Question 7.1 years ago, created a question with more than 1,000 views. For entrez gene summary
Popular Question 7.1 years ago, created a question with more than 1,000 views. For Kegg pathways overlay with log fold change values

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