User: michelle_low

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michelle_low50
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7 years, 3 months ago
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7 years, 6 months ago
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m***********@zoho.com

Posts by michelle_low

<prev • 5 results • page 1 of 1 • next >
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Comment: C: How to extract expressed genes from Affymetrix data
... Hi Belinda, Thanks for the reply. After reading the manual, I'm still not quite sure how to use the functions. If I start from the beginning and use only one cell (wild type) with 3 replicates. I wanna get only the expressed genes in this cell. I am not sure if the following script is correct to ...
written 7.3 years ago by michelle_low50
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How to extract expressed genes from Affymetrix data
... Hi all, I have done the differential expression analysis below but I wanna know the total number of expressed genes/transcripts in each cell (wild type and the mir223 knockout cell). Can somebody help? Thanks in advance.. Regards, Michelle R version 2.13.2 (2011-09-30) Copyright (C) 2011 The ...
gui written 7.3 years ago by michelle_low50 • updated 7.3 years ago by Belinda Phipson130
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Comment: C: Extracting topTable data from saved file
... ---- On Mon, 14 May 2012 23:50:48 -0700 Ovokeraye Achinike-Oduaran <ovokeraye@gmail.com> wrote ---- Thanks Ekta. I don't think that that's what I'm looking for though. I probably wasn't very clear with my question. I already have topTables meeting my set thresholds from different studies r ...
written 7.5 years ago by michelle_low50
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Comment: C: Convert gene symbols to ensembl id
... Thanks Fred and Martin. ---- On Sun, 06 May 2012 08:28:58 -0700 Martin Morgan <mtmorgan@fhcrc.org> wrote ---- On 05/06/2012 07:23 AM, Fred Boehm wrote: > Greetings, Michelle, > > I haven't worked with mouse data, but I think that the function getBM() > in the bioconductor packag ...
written 7.5 years ago by michelle_low50
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Convert gene symbols to ensembl id
... Hi all, I have a list of gene symbols generated from the differential expression analysis below. How do I convert these symbols to emsembl id? Thanks Regards, Michelle R version 2.14.1 (2011-12-22) Platform: x86_64-pc-mingw32/x64 (64-bit) > library(affy) > library(limma) > pd=read ...
convert written 7.5 years ago by michelle_low50 • updated 7.5 years ago by Fred Boehm20

Latest awards to michelle_low

Great Question 7.3 years ago, created a question with more than 5,000 views. For Convert gene symbols to ensembl id
Popular Question 7.3 years ago, created a question with more than 1,000 views. For How to extract expressed genes from Affymetrix data
Popular Question 7.3 years ago, created a question with more than 1,000 views. For Convert gene symbols to ensembl id

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