User: Burkhard Heil

gravatar for Burkhard Heil
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7 years, 4 months ago
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7 years, 4 months ago
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Posts by Burkhard Heil

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Comment: C: affylmGUI/biocReposList() Problem
... Hi Jim, thanks again for all your help. I can't see any messages to R from affylmGUI. But I think the problem is, that for some reason affylmGUI can't identify the correct annotation package for the Chip and tries downloading it yousing defunct procedures. So for now I'll ignore the problem and ann ...
written 7.4 years ago by Burkhard Heil30
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Comment: C: affylmGUI/biocReposList() Problem
... Hi Jin, thanks for your help! It's an HuGene 1.0 ST chip and I downloaded the annotation (to be sure every hugene* annotation package) but I still got the same problem. Just to be sure, by "reducing to lower case and removing...." you don't mean to change anything in the CEL file (or wherever) but ...
written 7.4 years ago by Burkhard Heil30
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affylmGUI/biocReposList() Problem
... Hi everybody, when trying to calculate the Toptable in affylmGUI there pops the following error message up: Error: The biocReposList() function is defunct. Please use biocLite() to install packages source("http://bioconductor.org/biocLite.R") biocLite("") if you really need to get the list of Bioc ...
affylmgui written 7.4 years ago by Burkhard Heil30 • updated 7.4 years ago by James W. MacDonald52k

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