User: Makis Motakis

gravatar for Makis Motakis
Reputation:
20
Status:
New User
Location:
Japan
Last seen:
3 years, 2 months ago
Joined:
6 years ago
Email:
e*******@hotmail.com

Posts by Makis Motakis

<prev • 4 results • page 1 of 1 • next >
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Answer: A: Bioinformatics Research Associate, University of Adelaide
... Dear Dr Pederson, My name is Efthymios Motakis and I am a research scientist at RIKEN, Yokohama, Japan. I received my PhD in Statistics from the University of Bristol on January 2008. I would like to apply for the position of Bioinformatics Research Associate, University of Adelaide. Then link you ...
written 3.2 years ago by Makis Motakis • 20
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edgeR rpkm function
... Hello all,  I want to calculate RPKM values of my data and, following previous posts, I use the function rpkm() of edgeR. Initially, I checked how the function works on the hypothetical data of http://blog.nextgenetics.net/?e=51 (Measurement of mRNA abundance using RNA-seq data: RPKM measure is inc ...
edger rpkm written 3.7 years ago by Makis Motakis • 20 • updated 3.7 years ago by Gordon Smyth ♦ 35k
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Gene-gene correlation analysis with RNA-seq
... Dear list, I have a large collection of RNA-seq data (300 samples from different cells types, e.g. 2 samples from Basophils, 3 samples from cultured Mast cells etc; the number of replicates per cell type varies from 2 to 5). I would like to analyze the counts or the TPM data and find correlated Ref ...
edger written 5.3 years ago by Makis Motakis • 20 • updated 8 months ago by Gordon Smyth ♦ 35k
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Differential expression analysis of CAGE data
... Hello list, My name is Makis, I am a bioinformatics post-doc fellow and, recently, I started working on a CAGE project. I am new on the field and trying to figure out some things, so I would much appreciate any comments on my problem. I am sorry if my question sounds a bit confusing... I have a ...
transcription annotation convert edger deseq written 6.1 years ago by Makis Motakis • 20 • updated 6.1 years ago by Steve Lianoglou ♦ 12k

Latest awards to Makis Motakis

Popular Question 3.2 years ago, created a question with more than 1,000 views. For edgeR rpkm function
Popular Question 3.2 years ago, created a question with more than 1,000 views. For [bioc] correlation analysis of RNA-seq
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