User: Andrzej Oleś

gravatar for Andrzej Oleś
Andrzej Oleś680
Reputation:
680
Status:
Trusted
Location:
EMBL Heidelberg, Germany
Website:
https://github.com/aoles
Twitter:
andrzejkoles
Scholar ID:
Google Scholar Page
Last seen:
1 week ago
Joined:
5 years, 6 months ago
Email:
a***********@embl.de

Posts by Andrzej Oleś

<prev • 77 results • page 1 of 8 • next >
0
votes
1
answers
62
views
1
answers
Comment: C: How to Remove EBImage objects that have holes?
... Thank you Wolfgang for providing a solution to the problem. This is probably the way to go. Note that there is a dedicated function rmObjects to remove objects from images which is the preferred approach for performance reasons. It also provides an easy way to re-label objects such that the maximum ...
written 12 days ago by Andrzej Oleś680
0
votes
1
answers
147
views
1
answers
Comment: C: simpleRNASeq easyRNAseq warnings edgeR error
... Thanks for your patience. In order to proceed, could you maybe provide a self-contained MWE illustrating the issue? Maybe it's enough to share the .rda files referenced in your code. ...
written 3 months ago by Andrzej Oleś680
0
votes
1
answers
147
views
1
answers
Comment: C: simpleRNASeq easyRNAseq warnings edgeR error
... Thank you for reporting this. I will look whether there is anything which could be done on the DEFormats side to address this. I will get back to you as soon as I know more. ...
written 3 months ago by Andrzej Oleś680
0
votes
1
answers
148
views
1
answers
Answer: A: no floating figures with biocstyle
... There is a knitr code chunk option fig.pos meant for the purpose of controlling the placement of floats. When it is set to 'H' it will freeze the figure by unfloating it. Note the uppercase which is important because this is a special placement specifier which also requires the LaTeX package float t ...
written 6 months ago by Andrzej Oleś680
0
votes
1
answers
148
views
1
answers
Comment: C: no floating figures with biocstyle
... Is your source a .Rnw or a .Rmd file? ...
written 6 months ago by Andrzej Oleś680
0
votes
0
answers
783
views
0
answers
Comment: C: Bioconductor packages now each have a DOI.
... Another one: when are the DOIs assigned, are they available as soon as the package gets accepted and its landing page is created? ...
written 8 months ago by Andrzej Oleś680
0
votes
0
answers
783
views
0
answers
Comment: C: Bioconductor packages now each have a DOI.
... Does the DOI resolve to package short URL in the form http://bioconductor.org/packages/Biobase such that it can be used with packages which have been newly added to devel but haven't made it to release yet? ...
written 8 months ago by Andrzej Oleś680
0
votes
0
answers
463
views
0
answers
Comment: C: Bioconductor / COHCAP GitHub Update
... Did you run the git remote add command in the package root dir? I see a similar error message when I try to run a git command but I've forgotten to cd into the package directory. ...
written 8 months ago by Andrzej Oleś680
0
votes
1
answers
967
views
1
answers
Answer: A: Updates to BiocStyle formatting
... As announced previously, the style functions have been updated to the new formatting in BiocStyle version 2.5.19. Package maintainers who already use the new style (latex2, pdf_document2 or html_document2) are now encouraged to update their vignettes by stripping the trailing "2" from BiocStyle fun ...
written 8 months ago by Andrzej Oleś680
0
votes
1
answers
967
views
1
answers
Comment: C: Updates to BiocStyle formatting
... BiocStyle::html_document is Bioconductor's standard format for authoring both package vignettes and more general documents such as training materials etc. There are currently no plans on extending rmarkdown::html_vignette. ...
written 8 months ago by Andrzej Oleś680

Latest awards to Andrzej Oleś

Scholar 10 months ago, created an answer that has been accepted. For A: EBImage crashing in for-loop
Teacher 10 months ago, created an answer with at least 3 up-votes. For A: Only 1s created by erode()
Scholar 24 months ago, created an answer that has been accepted. For A: reactive CellCODE heatmap
Scholar 24 months ago, created an answer that has been accepted. For A: Not able to display actual grayscale image using EBImage
Teacher 24 months ago, created an answer with at least 3 up-votes. For A: Only 1s created by erode()
Scholar 24 months ago, created an answer that has been accepted. For A: EBImage read png causes R to crash
Scholar 24 months ago, created an answer that has been accepted. For A: EBImage crashing in for-loop
Scholar 2.0 years ago, created an answer that has been accepted. For A: EBImage crashing in for-loop
Scholar 2.4 years ago, created an answer that has been accepted. For A: EBImage crashing in for-loop
Scholar 2.8 years ago, created an answer that has been accepted. For A: EBImage crashing in for-loop

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 432 users visited in the last hour