User: Knut Hansen

gravatar for Knut Hansen
Knut Hansen20
Reputation:
20
Status:
New User
Location:
Norway
Last seen:
3 years, 11 months ago
Joined:
7 years ago
Email:
k**********@uit.no

Posts by Knut Hansen

<prev • 7 results • page 1 of 1 • next >
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Comment: C: Problems installing BiocLite on Fedora 23, R 3.2.2
... You were absolutely right. Now it works! Thank you! Knut H. ...
written 4.0 years ago by Knut Hansen20
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Comment: C: Problems installing BiocLite on Fedora 23, R 3.2.2
... Yes I did install biocGenerics, just an error in my post. BiocInstaller is v. 1.20.1, but there were 25 packages with version mismatch. Fixing that BiocInstaller::biocValid() now reports TRUE. But my problem now seems to be permissions. I have installed all packages as root. When I try to do libra ...
written 4.0 years ago by Knut Hansen20
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Comment: C: Problems installing BiocLite on Fedora 23, R 3.2.2
... Thank you, that got me a bit further. All packages now installed with quite a few warnings, but no errors. My ultimate goal, however, is to install the "lumi" package under R v. 3.2.2. Now, biocLite('lumi') will install this package to without errors, but with some warnings. But when I try to load i ...
written 4.0 years ago by Knut Hansen20
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(Closed) Problems installing BiocLite on Fedora 23, R 3.2.2
... I'm running Fedora 23 with KDE 5.16. I'm trying to install biocLite using the commands source("https://bioconductor.org/biocLite.R") biocLite() as root. After answering 'a' to the question on which packages I want to install, I get the following (edited) output: * installing *source* package ‘b ...
install bioclite gcc fedora written 4.0 years ago by Knut Hansen20
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Problems installing BiocLite on Fedora 23, R 3.2.2
... I'm running Fedora 23 with KDE 5.16. I'm trying to install biocLite using the commands source("https://bioconductor.org/biocLite.R") biocLite() as root. After answering 'a' to the question on which packages I want to install, I get the following (edited) output: * installing *source* package ‘b ...
install bioclite gcc fedora written 4.0 years ago by Knut Hansen20 • updated 4.0 years ago by Martin Morgan ♦♦ 24k
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Comment: C: arrayQualityMetrics run as batch-job: unable to start device PNG
... I found that if I include the line: options(bitmapType="cairo") in my R-script everything works fine! Knut Den 13. nov. 2012 18:06, skrev Wolfgang Huber: > Hi Knut > > if James' pointers do not help, can you please send an example script that reproduces the error and the output of session ...
written 7.0 years ago by Knut Hansen20
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arrayQualityMetrics run as batch-job: unable to start device PNG
... Hi, I'm trying to run a R-script which calls arrayQualityMetrics as a batch-job on a remote machine. But I get the error message: Error in X11(paste("png::", filename, sep = ""), g$width, g$height, pointsize, : unable to start device PNG The script runs fine if I run it interactively from the c ...
arrayqualitymetrics written 7.0 years ago by Knut Hansen20 • updated 7.0 years ago by James W. MacDonald51k

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Popular Question 4.0 years ago, created a question with more than 1,000 views. For Problems installing BiocLite on Fedora 23, R 3.2.2

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