Moderator: Laurent Gatto

gravatar for Laurent Gatto
Laurent Gatto740
Reputation:
740
Status:
Trusted
Location:
United Kingdom
Website:
http://lgatto.github.io/
Twitter:
lgatt0
Scholar ID:
Google Scholar Page
Last seen:
3 weeks, 4 days ago
Joined:
9 years, 11 months ago
Email:
l****@cam.ac.uk

Laurent Gatto is a senior research associate in the Department of Biochemistry, University of Cambridge and a visiting scientist in the PRIDE team at the EBI. He graduated in Biology from the Free University of Brussels, Belgium, and subsequently earned his PhD in Evolutionary Biology. He pursued his education at the University of Namur studying Computer Science before working in industry on genetic and transcriptomic data analysis. In January 2010, he joined the Cambridge Centre for Proteomics to work on quantitative and organelle proteomics and. In August 2013, he established the Computational Proteomics Unit in the Cambridge System Biology Centre.

Posts by Laurent Gatto

<prev • 161 results • page 1 of 17 • next >
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Answer: A: mzR (2.8.1) Rcpp (0.12.10) compiler linker issue in Bioconductor 3.4, R 3.3.3
... I don't think the error you see is a linker issue. The problem is that the files that you want to read are cdf files [12] "/home/lg390/R/x86_64-pc-linux-gnu-library/3.4/faahKO/cdf/WT/wt22.CDF" > basename(cdf_files) [1] "ko15.CDF" "ko16.CDF" "ko18.CDF" "ko19.CDF" "ko21.CDF" "ko22.CDF" [7] "wt1 ...
written 6 weeks ago by Laurent Gatto740
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Answer: A: mzR failure installation
... I am following up about this issue which has been resolved. Details available here.   ...
written 8 weeks ago by Laurent Gatto740
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Answer: A: Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
... A couple of places left due to last-minute cancellations! More details and registration: http://www.dataprogrammers.net/embl_apr2017/ ...
written 9 weeks ago by Laurent Gatto740
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Comment: C: mzR failure installation
... What's the output of sessionInfo()? ...
written 10 weeks ago by Laurent Gatto740
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News: May Institute Computation and statistics for mass spectrometry and proteomics
... Dear all, Some on this forum might be interested in the May Institute Computation and statistics for mass spectrometry and proteomics at the Northeastern University, Boston MA, on 1 - 12 May 2017. On the programme, we have Beginner's and advanced R, Statistics for quantitative mass spectrometry and ...
proteomics news biostatistics mass spectrometry written 3 months ago by Laurent Gatto740
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News: Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
... Dear all, We are organising a two-day advanced R programming course in Heidelberg in April 2017 focusing on advanced techniques in writing reliable, robust code in R. The material will provide the opportunity to gain experience and understanding of object-oriented programming, packaging your code f ...
news workshop course written 3 months ago by Laurent Gatto740
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Comment: C: different compilers and mzR build fails
... Hi Lejeczek, I opened an issue in the mzR github issue tracker. I hope that one of the other developers will be able to help. (By the way, I missed this question because it missed the mzR tag - I would suggest to always add the package name as this should automatically send an email to developers.) ...
written 5 months ago by Laurent Gatto740
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Comment: C: cannot : source("https://bioconductor.org/biocLite.R")
... Have you tried to run install.packages("BiocInstaller", repos="https://bioconductor.org/packages/3.3/bioc") as suggested in the message? ...
written 5 months ago by Laurent Gatto740
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Comment: C: Question about Error of "biocLite.R"
... It would be helpful to provide the actual error. ...
written 5 months ago by Laurent Gatto740
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Comment: C: mzR failed to open '.raw' file
... >Thank you for your quick reply, Laurent. Do I understand correct that >it is not possible to do the whole analysis in R then? Not sure what your whole analysis is, but once you have converted your files, there's a lot you can do in R. But possibly not everything. Have a look at the RforPr ...
written 7 months ago by Laurent Gatto740

Latest awards to Laurent Gatto

Scholar 13 months ago, created an answer that has been accepted. For A: how can i import a Mass spectrometry data in R
Scholar 13 months ago, created an answer that has been accepted. For A: Converting Synapter object output into a MSnbase-compatible object
Scholar 15 months ago, created an answer that has been accepted. For A: how can i import a Mass spectrometry data in R
Scholar 19 months ago, created an answer that has been accepted. For A: Converting Synapter object output into a MSnbase-compatible object
Scholar 19 months ago, created an answer that has been accepted. For A: how can i import a Mass spectrometry data in R
Centurion 19 months ago, created 100 posts.
Supporter 2.6 years ago, voted at least 25 times.
Autobiographer 2.7 years ago, has more than 80 characters in the information field of the user's profile.

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