User: Pengcheng Yang

Reputation:
50
Status:
Trusted
Location:
China
Last seen:
6 months, 4 weeks ago
Joined:
4 years, 2 months ago
Email:
p******@gmail.com

Posts by Pengcheng Yang

<prev • 12 results • page 1 of 2 • next >
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Comment: C: Fail to load "MotifDb" package
... Hi Paul Shanno, Thank you for your reply and the provided information. I have tried the solution and successfully loaded the MotifDb library under R 3.3.2 version. Pengcheng ...
written 7 months ago by Pengcheng Yang50
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Comment: C: Fail to load "MotifDb" package
... The following solution come from: The reply from Herve Pages You'll actually have to reinstall from source i.e. with: biocLite(c("BiocGenerics", "S4Vectors", "IRanges", "GenomicRanges"), type="source") which won't work if your system is not set up for doing this. Our Windows and Mac bin ...
written 7 months ago by Pengcheng Yang50
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Comment: C: Error in GRanges: could not find symbol "recursive" in environment of the generi
... Hi Herve Pages, I cann't reinstall these packages from source on my Win7 system. As you have suggested, I will switch to the R 3.3.2 version. Thank you. Error : .onLoad failed in loadNamespace() for 'MotifDb', details: call: c(values, x) error: could not find symbol "recursive" in environment ...
written 7 months ago by Pengcheng Yang50
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Comment: C: getGEO function not identifying local file
... In my case, the getGEO(filename="GSE11724.soft") give the following error Error in readLines(con, lineCounts[1, 1] - 1) : invalid 'n' argument ...
written 7 months ago by Pengcheng Yang50
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Fail to load "MotifDb" package
... Hi all, I have successfully installed "MotifDb" package,but failed to load it, and got the following error message. After a while searching, It may be caused by some R package that not updated to the newest version. However, I have upgraded all the packages. Thank you! ===================== > ...
motifdb library load written 7 months ago by Pengcheng Yang50 • updated 7 months ago by Paul Shannon360
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Comment: C: Error in intI when plotting igraph graph.
... Is there solution for this thread? I have encountered exactly the same problem. ...
written 9 months ago by Pengcheng Yang50
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parameters in build.mim in minet package
... Hi,  Using minet package to construct GRN, the first step is to build the mutual information matrix using build.mim function. However, sparse documentation on the influence of the alternative methods used to the final constructed network. The parameter including "estimator" and "discretization". I ...
minet build.mim written 9 months ago by Pengcheng Yang50
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Comment: C: Package qvalue - can it be installed without TCL-TK support?
... As John suggested, the solution is: downloaded the package from: http://www.bioconductor.org/packages/release/bioc/src/contrib/qvalue_1 .38.0.tar.gz untar and modify the file qvalue/NAMESPACE: delete the following lines: importFrom(tcltk, tclvalue, "tclvalue<-", tclVar, tkbutton, ...
written 3.4 years ago by Pengcheng Yang50
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Comment: C: ERROR: compilation failed for package XVector
... Hi Herve, Originally, I wanted to install spliceR, which depends on GenomicRanges, then which depends on XVector. I have installed other depended packages successfully by local methods. But not XVector. Thanks Herve, I have installed XVector now, but haven't tested it. Best, Pengcheng On 2013/7/2 ...
written 4.2 years ago by Pengcheng Yang50
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Comment: C: ERROR: compilation failed for package XVector
... Thank you Dan, I have installed successfully as you suggested. Best, Pengcheng On 2013/7/24 10:21, Dan Tenenbaum wrote: > On Tue, Jul 23, 2013 at 6:44 PM, Pengcheng Yang wrote: >> Hi Herve, >> >> I did have tested using biocLite() method to install XVector. Here is the >& ...
written 4.2 years ago by Pengcheng Yang50

Latest awards to Pengcheng Yang

Supporter 7 months ago, voted at least 25 times.
Popular Question 3.4 years ago, created a question with more than 1,000 views. For ERROR: compilation failed for package XVector

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