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Comment: using the goana function from edgeR
2.3 years ago
David R
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0
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0
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1.4k
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Comment:
C: RNA-Seq and edgeR: remarkable differences between cpms and fitted values
4.9 years ago
David R
▴ 90
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1.4k
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Comment:
C: RNA-Seq and edgeR: remarkable differences between cpms and fitted values
4.9 years ago
David R
▴ 90
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0
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3.1k
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Comment:
C: limma random effects and multi level experiments
5.0 years ago
David R
▴ 90
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3.1k
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Comment:
C: limma random effects and multi level experiments
5.0 years ago
David R
▴ 90
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3.1k
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Comment:
C: limma random effects and multi level experiments
5.0 years ago
David R
▴ 90
0
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0
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928
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Comment:
C: Circumventing statistical non-significance on a triple interaction using edgeR
5.8 years ago
David R
▴ 90
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1.3k
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Comment:
C: Trying to simplify Interaction analysis with edger, and propably failing to do s
6.1 years ago
David R
▴ 90
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0
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1.3k
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Comment:
C: Trying to simplify Interaction analysis with edger, and propably failing to do s
6.1 years ago
David R
▴ 90
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1.6k
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Comment:
C: Loads, really loads of DEGs after edgeR differential analysis
6.4 years ago
David R
▴ 90
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2
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1.6k
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Comment:
C: Loads, really loads of DEGs after edgeR differential analysis
6.4 years ago
David R
▴ 90
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1.6k
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Comment:
C: Loads, really loads of DEGs after edgeR differential analysis
6.4 years ago
David R
▴ 90
0
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1
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1.6k
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Comment:
C: Loads, really loads of DEGs after edgeR differential analysis
6.4 years ago
David R
▴ 90
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1.2k
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Comment:
C: Removing batch effect on edgeR when interactons are looked at
6.6 years ago
David R
▴ 90
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1.2k
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Comment:
C: Removing batch effect on edgeR when interactons are looked at
6.6 years ago
David R
▴ 90
0
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0
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2.1k
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Comment:
C: Three way-interaction on voom (limma) data, including a factor with > 2 levels
6.8 years ago
David R
▴ 90
0
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1
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2.1k
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Comment:
C: Three way-interaction on voom (limma) data, including a factor with > 2 levels
6.8 years ago
David R
▴ 90
0
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0
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3.6k
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Comment:
C: How to deal with low-depth RNA-Seq within DESeq2 or edgeR
7.2 years ago
David R
▴ 90
0
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1
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3.6k
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Comment:
C: How to deal with low-depth RNA-Seq within DESeq2 or edgeR
7.2 years ago
David R
▴ 90
0
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0
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3.8k
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Comment:
C: DESEq2 log2FoldChange and lfcSE calculations
7.5 years ago
David R
▴ 90
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0
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2.1k
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Comment:
C: edgeR: AveLogCPM after estimateGLMCommonDisp
7.5 years ago
David R
▴ 90
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1
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2.1k
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Comment:
C: edgeR: AveLogCPM after estimateGLMCommonDisp
updated 7.5 years ago by
Gordon Smyth
50k • written 7.5 years ago by
David R
▴ 90
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2.1k
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Comment:
C: edgeR: AveLogCPM after estimateGLMCommonDisp
7.5 years ago
David R
▴ 90
0
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0
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2.1k
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Comment:
C: edgeR: AveLogCPM after estimateGLMCommonDisp
7.5 years ago
David R
▴ 90
0
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1
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2.1k
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Comment:
A: edgeR: AveLogCPM after estimateGLMCommonDisp
7.5 years ago
David R
▴ 90
0
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1
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4.3k
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Comment:
C: edgeR glmLRT and interaction effect: an example
8.1 years ago
David R
▴ 90
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0
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4.3k
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Comment:
C: edgeR glmLRT and interaction effect: an example
8.1 years ago
David R
▴ 90
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0
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4.3k
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Comment:
A: edgeR glmLRT and interaction effect: an example
8.1 years ago
David R
▴ 90
0
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0
replies
3.8k
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Comment:
C: Number of co-variables k in RUVSeq (RUVr)
8.4 years ago
David R
▴ 90
0
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0
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8.0k
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Comment:
C: DESeq2: NA on padj column when doing bonferroni
10.3 years ago
David R
▴ 90
0
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0
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8.0k
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Comment:
C: DESeq2: NA on padj column when doing bonferroni
10.3 years ago
David R
▴ 90
0
votes
1
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8.0k
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Comment:
C: DESeq2: NA on padj column when doing bonferroni
10.3 years ago
David R
▴ 90
0
votes
2
replies
8.0k
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Comment:
C: DESeq2: NA on padj column when doing bonferroni
10.3 years ago
David R
▴ 90
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