User: Jiping Wang

gravatar for Jiping Wang
Jiping Wang10
Reputation:
10
Status:
New User
Location:
Last seen:
1 week, 3 days ago
Joined:
4 years, 10 months ago
Email:
j*****@northwestern.edu

Posts by Jiping Wang

<prev • 3 results • page 1 of 1 • next >
0
votes
1
answer
70
views
1
answers
Comment: C: How to use Rsamtool or GenomicAlignments to calculate RAN-seq read coverage curv
... Hi Herve, Thanks for your helpful comments. There is one issue here (If I misunderstand your comment, please correct me). In the genome there are genes that sit on the opposite strands, but in overlapping genomic region. Many of the existing RNA-seq data do not distinguish which strand they orig ...
written 11 days ago by Jiping Wang10
1
vote
1
answer
70
views
1
answer
How to use Rsamtool or GenomicAlignments to calculate RAN-seq read coverage curves
... We recently did some work on correction for RNA degradation bias for RNA-seq data. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1682-7. This requires us to calculate the RNA-seq read coverage score on all exon regions of every genes. I wonder whether Rsamtools or GenomicAlignm ...
rsamtools genomicalignments rna-seq coverage score written 17 days ago by Jiping Wang10 • updated 12 days ago by Hervé Pagès ♦♦ 14k
0
votes
1
answer
576
views
1
answers
Answer: A: NuPoP cannot recognize my fasta file
... Can you send me the DNA sequence file? so I can check into it. On 8/1/14, 4:35 PM, "Catherine [guest]" wrote: >Hi, >Thank you in advance for any help. >Here is my code and results >> writeXStringSet(DNAcutout1.seq, "DNAcutout2.fa", append=FALSE, >>compress=FALSE, compression_ ...
written 4.9 years ago by Jiping Wang10

Latest awards to Jiping Wang

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 230 users visited in the last hour