User: Thomas Pfau

gravatar for Thomas Pfau
Thomas Pfau20
Reputation:
20
Status:
New User
Location:
Luxembourg
Last seen:
4 years, 2 months ago
Joined:
5 years, 3 months ago
Email:
t**********@uni.lu

Posts by Thomas Pfau

<prev • 4 results • page 1 of 1 • next >
0
votes
3
answers
737
views
3
answers
Answer: A: Problem with frma median_polish
... Hi Matt,   Thanks for the info. I read that part about median and median polish being the same in the documentation but admittedly I was not sure, whether it meant, that it was the same IF "probe effects have been pre-estimated and frozen" by the user before or whether they were generally the same ...
written 4.2 years ago by Thomas Pfau20
1
vote
3
answers
737
views
3
answers
Problem with frma median_polish
... Hi, I'm trying to (re)barcode some human 1.0 st arrays and am encountering a problem I did not have earlier. I used to use media_polish as summarization method but when I try to run those with my current files I get the following error:  eset <- frma(affyRaw,input.vecs=hugene.1.0.st.v1frmavecs, ...
frma software error written 4.2 years ago by Thomas Pfau20 • updated 4.2 years ago by Matthew McCall830
0
votes
1
answer
674
views
1
answers
Answer: A: hugene10sttranscriptclusterACCNUM has no mappings
... Hi Marc, Thanks for the clarification. I just stumbled over this as I read that newer chips often have transcript specific probes and since entrez gene ids do not reflect those probes I was kind of hoped that these accessions would allow me a more precise mapping (or at least the potential to then ...
written 5.3 years ago by Thomas Pfau20
0
votes
1
answer
575
views
1
answer
hugene10sttranscriptclusterACCNUM has no mappings
... Hello, I just tried to get a probe to accession matching the above annotation database. In particular it does not yield any mappings for accessions. (i.e. x <- hugene10sttranscriptclusterACCNUM mapped_probes <- mappedkeys(x) yields an empty mapped_probes list. I'm Running R 3.1.1 on ubuntu. ...
go probe written 5.3 years ago by Thomas Pfau20 • updated 5.3 years ago by James W. MacDonald52k

Latest awards to Thomas Pfau

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 128 users visited in the last hour