User: alex.pelletier

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Posts by alex.pelletier

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Need assistance with complicated DESeq2 design
... Hello. I'm familiar with DESeq2 but the most complex design equations I've used are having blocked pairs. I need to perform a more complicated design but I'm having trouble formulating the equation. I have a design table that I've read in that contains all the relevant information. Here are the spec ...
deseq2 design written 3.7 years ago by alex.pelletier10
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DESeq2 One-way ANOVA with 3 sample groups?
... I'm trying to use DESeq2 to perform something like a one-way ANOVA on 3 groups of samples. I've seen references to DESeq2's capability of performing similar ANOVAs such as this forum thread: http://seqanswers.com/forums/showthread.php?t=16539 However, I can't seem to find anything in DESeq2's manu ...
deseq2 anova written 4.9 years ago by alex.pelletier10 • updated 4.9 years ago by Michael Love25k

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Popular Question 3.7 years ago, created a question with more than 1,000 views. For DESeq2 One-way ANOVA with 3 sample groups?

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