User: Patrick Kimes

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Posts by Patrick Kimes

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Job: Statistician I - Department of Data Sciences, Dana-Farber Cancer Institute
... The **Department of Data Sciences** at the **Dana-Farber Cancer Institute** is looking to hire a **masters-level Data Scientist/Statistician** to work at the intersection of statistics, genomics, and cancer research. The successful applicant will have the opportunity to work on a wide range of proje ...
job genomics biostatistics data science written 7 months ago by Patrick Kimes0
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Comment: C: Importing RSEM transcript-level data using tximport
... I should have read the docs closer - thanks for pointing me to the manual options! (Also, sorry - probably shouldn't have assumed that these changes would be "fairly quick". Thanks for the hard work.) ...
written 24 months ago by Patrick Kimes0
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Importing RSEM transcript-level data using tximport
... I'd like to read in transcript-level results from RSEM using the tximport package, but this does not appear to be supported. The tximport vignette only describes importing sample.genes.results (gene-level) data, and the tximport::tximport function is hard-coded to set txIn = FALSE when type = "rsem" ...
tximport rsem written 24 months ago by Patrick Kimes0 • updated 24 months ago by Michael Love26k

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