User: stefano.mangiola

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Posts by stefano.mangiola

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Contrast matrix for a continuous covariate - for EGSEA algorithm
... Hello,   I have a simple design matrix as such   (Intercept) CAPRA_TOTAL merged_100HQ.N728.S517_S32_trimmedBBduk.Aligned.out.sam 1 4 merged_300.N728.S516_S52_trimmedBBduk.Aligned.out.sam 1 ...
design and contrast matrix egsea written 17 months ago by stefano.mangiola0
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Combat - error - system is computationally singular
... Hello, I am using Combat over a RNA-seq dataset, transformed with Voom. Combat is giving me a strange error, since my design matrix seems unambiguous. ---------------------------------------------------- #Conditions > myGroups [1] b b b b b lgnmi lgnmi lgnmi lgnmi hgnmi ...
rnaseq software error complex-design combat written 4.8 years ago by stefano.mangiola0 • updated 4.8 years ago by Peter Langfelder2.1k

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Popular Question 4.8 years ago, created a question with more than 1,000 views. For Combat - error - system is computationally singular

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