User: madal

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madal0
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Posts by madal

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Multi factor analysis in DEXSeq
... Hi, I have run a DEXseq anlysis of my data, which consist of two different conditions (TG/WT) and in two different studies (S3/S5). I would like to retrieve the result tables only concerning the condition effect, where the study effect is removed. The reason why I ask for this function, is because ...
dexseq deseq2 multiple factor design formulafullmodel written 4.4 years ago by madal0 • updated 4.4 years ago by Simon Anders3.5k
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Difference between DESeq2 versions and explanation of betaPrior = False and padj
... Hi, First of all, I'll excuse for the long question I'm about to post. I am working on RNA-seq data from mice with 5 gene knock out on one allele (KN), contra wildtype (WT) mice. The knock out has been very well studied and it is absolutely certain they have a 50% decrees in expression of these 5 ge ...
deseq2 logfc adjusted pvalue written 4.4 years ago by madal0 • updated 4.4 years ago by Michael Love23k

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Popular Question 4.2 years ago, created a question with more than 1,000 views. For Difference between DESeq2 versions and explanation of betaPrior = False and padj

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