User: Lluís Revilla Sancho

Reputation:
470
Status:
Trusted
Location:
European Union
Website:
https://b101nfo.blogsp...
Twitter:
Lluis_Rev
Last seen:
4 hours ago
Joined:
4 years, 4 months ago
Email:
l************@gmail.com

I am the author and maintainer of the BioCor package

Posts by Lluís Revilla Sancho

<prev • 229 results • page 1 of 23 • next >
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Comment: C: Error in sizeRestrictedClusterMerge: replace is not a multiple of replacement le
... The new version of WGCNA and changing the maxBlockSize worked. Thanks ...
written 1 day ago by Lluís Revilla Sancho470
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Comment: C: Error in sizeRestrictedClusterMerge: replace is not a multiple of replacement le
... No, luck: > net <- blockwiseModules(biggermatrix, power = 7, + TOMType = "signed", + networkType = "unsigned", + minModuleSize = 30, reassignThreshold = 0, + mergeCutHeight = 0.2 ...
written 7 days ago by Lluís Revilla Sancho470
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Error in sizeRestrictedClusterMerge: replace is not a multiple of replacement length
... I was following the tutorials of WGCNA with a new dataset and I am getting an error about `sizeRestrictedClusterMerge` were the replacement is not of the same length as the values to replace: ```r > net <- blockwiseModules(biggermatrix, power = 7, + TOMType = "signed", ...
wgcna written 7 days ago by Lluís Revilla Sancho470 • updated 2 days ago by Peter Langfelder1.9k
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Comment: C: Disease semantic similarity
... Welcome to the support site. Could you provide the error message you get, and the R version and the version of the packages you use? This will make it easier to help you ...
written 18 days ago by Lluís Revilla Sancho470
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Comment: C: Trouble installing GOSemSim
... did you try updating S4Vectors package? The problem seems to be a change on that package that it is needed by GOSemSim ...
written 9 weeks ago by Lluís Revilla Sancho470
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Comment: C: Correlate WGCNA modules from 2 separate analyses (small and large RNA)
... At most you can say (if they are on the same samples) that a module on small RNA behaves similar or opposed as a module in long RNA ...
written 11 weeks ago by Lluís Revilla Sancho470
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Comment: C: Yeast org.Sc.sgd.db lacks SYMBOL - should it have one? - how to make it interope
... I was just answering how to obtain the "names" of the genes as it is your question, but your last comment is in another direction. That's why my comment doesn't help you with your plotting problems. After obtaining the "names" of the genes you can replace the internal data of the object to be used b ...
written 11 weeks ago by Lluís Revilla Sancho470
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Comment: C: Yeast org.Sc.sgd.db lacks SYMBOL - should it have one? - how to make it interope
... You can always run the "non readable" test and then map the ids back to COMMON or GENENAME, this doesn't require modifying existing infrastructure ...
written 11 weeks ago by Lluís Revilla Sancho470
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Comment: C: My post stopped getting sent via email
... I'm not the admin of the site. Below the post I see an option to set up the method of follow a post. Maybe the issue should be raised at [github repository][1] if it is really a bug. [1]: https://github.com/Bioconductor/support.bioconductor.org "github repository of the website" ...
written 3 months ago by Lluís Revilla Sancho470
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Comment: C: Error in Champ for Bioconductor performing GSEA analysis on Methlayion array dat
... Could you update all the other packages reported at the end of the R session? (curl, colorspace, tibble, openssl, VariantAnnotation, data.table, checkmate and rlang). Also these errors appearing after the R session information means you have some problems in the installation: do you have all the pa ...
written 4 months ago by Lluís Revilla Sancho470

Latest awards to Lluís Revilla Sancho

Popular Question 5 months ago, created a question with more than 1,000 views. For Unable to calculate in parallel what can be calculated on a for loop
Popular Question 7 months ago, created a question with more than 1,000 views. For Unable to calculate in parallel what can be calculated on a for loop
Scholar 7 months ago, created an answer that has been accepted. For A: Does anyone need to install an R package which is used by another package as imp
Teacher 11 months ago, created an answer with at least 3 up-votes. For A: Where can I use the VSN source code in C++?
Teacher 11 months ago, created an answer with at least 3 up-votes. For A: Does anyone need to install an R package which is used by another package as imp
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: Does anyone need to install an R package which is used by another package as imp
Scholar 23 months ago, created an answer that has been accepted. For A: Does anyone need to install an R package which is used by another package as imp
Teacher 23 months ago, created an answer with at least 3 up-votes. For A: Does anyone need to install an R package which is used by another package as imp
Scholar 23 months ago, created an answer that has been accepted. For A: WGCNA: What is `soft thresholding`?
Scholar 23 months ago, created an answer that has been accepted. For A: WGCNA: What is `soft thresholding`?
Teacher 23 months ago, created an answer with at least 3 up-votes. For A: Does anyone need to install an R package which is used by another package as imp
Voter 24 months ago, voted more than 100 times.
Centurion 2.2 years ago, created 100 posts.
Supporter 4.3 years ago, voted at least 25 times.
Scholar 4.3 years ago, created an answer that has been accepted. For A: WGCNA: What is `soft thresholding`?

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