Admin: Marcel Ramos

gravatar for Marcel Ramos
Marcel Ramos ♦♦ 310
Reputation:
310
Status:
Trusted
Location:
United States
Last seen:
2 weeks ago
Joined:
3 years, 8 months ago
Email:
m***********@roswellpark.org

Posts by Marcel Ramos

<prev • 45 results • page 1 of 5 • next >
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Comment: C: Can't access devel version of ExperimentHub in Travis CI
... There's an issue with (CRAN) BiocManager when switching to devel. Can you try using the GitHub version of BiocManager? remotes::install_github("Bioconductor/BiocManager") ...
written 15 days ago by Marcel Ramos ♦♦ 310
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Comment: C: Can't access devel version of ExperimentHub in Travis CI
... Have you tried to delete your Travis CI cache and re-running the build? ...
written 15 days ago by Marcel Ramos ♦♦ 310
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Comment: C: Can't access devel version of ExperimentHub in Travis CI
... Hi Kyle, Can you provide the GitHub repository of your package and a link to the Travis build page? Thanks, Marcel ...
written 15 days ago by Marcel Ramos ♦♦ 310
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Comment: C: MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not
... Hi Mario, Are you sure you have the latest version? It just re-ran it and it works for me. > sessionInfo() R version 3.5.1 Patched (2018-09-23 r75356) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 18.04.1 LTS Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.s ...
written 19 days ago by Marcel Ramos ♦♦ 310
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Answer: A: MultiAssayExperiment: Error in dimnames(x) <- dn : length of 'dimnames' [2] not
... Ciao Mario, Thanks for reporting this. This should be fixed in MultiAssayExperiment version 1.7.21. Best regards, Marcel ...
written 21 days ago by Marcel Ramos ♦♦ 310
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Comment: C: MultiAssayExperiment:combine two multiassayexperiment object
...     Prego!      ...
written 4 weeks ago by Marcel Ramos ♦♦ 310
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Answer: A: MultiAssayExperiment:combine two multiassayexperiment object
... Hi Mario, Thank you for posting this enhancement request. I have added it to MultiAssayExperiment 1.7.19 (devel). The stipulation is that experiment names must be unique across MultiAssayExperiment objects. Best regards, Marcel ...
written 5 weeks ago by Marcel Ramos ♦♦ 310
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Comment: C: MultiAssayExperiment:combine two multiassayexperiment object
... I get the idea but one requirement would be to keep experiment names unique across `MultiAssayExperiment` objects. I am coming up with a patch to allow this. Thanks, MR ...
written 5 weeks ago by Marcel Ramos ♦♦ 310
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Answer: A: MultiAssayExperiment: how can i change name of a experiment in a multiassayexper
... Hi all, Apologies for the delay but you can now use names<- to replace the names of experiments in a MultiAssayExperiment. library(MultiAssayExperiment) example(MultiAssayExperiment) names(mae) <- c("AffyTwo", "Methyl450", "RNA", "GISTICv2") mae Please ensure that you have version >= 1.7. ...
written 5 weeks ago by Marcel Ramos ♦♦ 310
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Comment: C: Simplifying a RaggedExperiment using qreduceAssay and weighted means.
... Hey all, How does this commit look? https://github.com/Bioconductor/RaggedExperiment/commit/9fdcfbf0779d3508af7ae0afc288f946758b60d6 Thanks, Marcel ...
written 3 months ago by Marcel Ramos ♦♦ 310

Latest awards to Marcel Ramos

Teacher 9 weeks ago, created an answer with at least 3 up-votes. For A: Querying specific TCGA datasets through the MultiAssayExperiment R package
Supporter 4 months ago, voted at least 25 times.
Teacher 4 months ago, created an answer with at least 3 up-votes. For A: Querying specific TCGA datasets through the MultiAssayExperiment R package
Scholar 16 months ago, created an answer that has been accepted. For A: Classes and methods for working with segmented copy number data
Scholar 18 months ago, created an answer that has been accepted. For A: Classes and methods for working with segmented copy number data
Scholar 18 months ago, created an answer that has been accepted. For A: Classes and methods for working with segmented copy number data

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