Admin: Marcel Ramos
Marcel Ramos ♦♦ 360
- Reputation:
- 360
- Status:
- Trusted
- Location:
- United States
- Last seen:
- 1 week, 2 days ago
- Joined:
- 4 years, 2 months ago
- Email:
- m***********@roswellpark.org
Posts by Marcel Ramos
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1
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Comment:
C: Updated Support Site Editor
... For those interested in video format, please see the links below to RMarkdown
Coursera course sections:
* [Coursera - Data Scientist's Toolbox](https://www.coursera.org/learn/data-scientists-tools/lecture/134kE/r-markdown)
* [Coursera - Stats for Genomic Data Science](https://www.coursera.org/learn ...
written 8 weeks ago by
Marcel Ramos ♦♦ 360
2
votes
1
answer
98
views
1
answers
... Hi Michael!
First, please make sure that other developers are not importing your generic from
your package. You could try the `revdep` package to check for those
https://github.com/r-lib/revdepcheck.
Otherwise, your change could break other packages. Also, if they are using your
generic, it wo ...
written 10 weeks ago by
Marcel Ramos ♦♦ 360
2
votes
1
answer
116
views
1
answers
... Hi Vinicius!
The `RaggedExperiment` class is designed to facilitate matrix-like representation of ragged ranges
from a `GRangesList` such as:
```
> assay(ragexp)
sample1 sample2
A 3 NA
B 4 NA
C 5 NA
D NA 1
E NA 2
```
Because the class is ...
written 3 months ago by
Marcel Ramos ♦♦ 360
0
votes
0
answers
154
views
0
answers
... Hi Nico,
Thank you for your feedback. We have made a small adjustment to theinstall page on Bioconductor.org. The pull request can be seen here: https://github.com/Bioconductor/bioconductor.org/pull/18
To (sort of) answer your question, we have detailed how to do 1 and 2 in the vignette and we hop ...
written 5 months ago by
Marcel Ramos ♦♦ 360
0
votes
1
answer
315
views
1
answers
... There's an issue with (CRAN) BiocManager when switching to devel.
Can you try using the GitHub version of BiocManager?
remotes::install_github("Bioconductor/BiocManager")
...
written 6 months ago by
Marcel Ramos ♦♦ 360
0
votes
1
answer
315
views
1
answers
... Have you tried to delete your Travis CI cache and re-running the build?
...
written 6 months ago by
Marcel Ramos ♦♦ 360
0
votes
1
answer
315
views
1
answers
... Hi Kyle,
Can you provide the GitHub repository of your package and a link to the Travis build page?
Thanks,
Marcel ...
written 6 months ago by
Marcel Ramos ♦♦ 360
0
votes
1
answer
349
views
1
answers
... Hi Mario, Are you sure you have the latest version? It just re-ran it and it works for me.
> sessionInfo()
R version 3.5.1 Patched (2018-09-23 r75356)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.1 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.s ...
written 6 months ago by
Marcel Ramos ♦♦ 360
2
votes
1
answer
349
views
1
answers
... Ciao Mario,
Thanks for reporting this.
This should be fixed in MultiAssayExperiment version 1.7.21.
Best regards,
Marcel
...
written 7 months ago by
Marcel Ramos ♦♦ 360
Latest awards to Marcel Ramos
Scholar
3 months ago,
created an answer that has been accepted.
For A: Classes and methods for working with segmented copy number data
Teacher
8 months ago,
created an answer with at least 3 up-votes.
For A: Querying specific TCGA datasets through the MultiAssayExperiment R package
Supporter
11 months ago,
voted at least 25 times.
Teacher
11 months ago,
created an answer with at least 3 up-votes.
For A: Querying specific TCGA datasets through the MultiAssayExperiment R package
Scholar
22 months ago,
created an answer that has been accepted.
For A: Classes and methods for working with segmented copy number data
Scholar
2.1 years ago,
created an answer that has been accepted.
For A: Classes and methods for working with segmented copy number data
Scholar
2.1 years ago,
created an answer that has been accepted.
For A: Classes and methods for working with segmented copy number data
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