Admin: Marcel Ramos
Marcel Ramos ♦♦ 50
- Reputation:
- 50
- Status:
- Trusted
- Location:
- United States
- Last seen:
- 1 month, 2 weeks ago
- Joined:
- 2 years, 5 months ago
- Email:
- m****************@roswellpark.org
Posts by Marcel Ramos
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... Update: RaggedExperiment is now in Bioconductor devel!
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written 3 months ago by
Marcel Ramos ♦♦ 50
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... Update: Please see the latest package submission (RaggedExperiment) for this type of data. https://github.com/Bioconductor/Contributions/issues/339 and the GitHub version of the package https://github.com/Bioconductor/RaggedExperiment/
Sincerely,
Marcel
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written 3 months ago by
Marcel Ramos ♦♦ 50
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... Hi Rob,
I would really discourage the use of View for anything other than a matrix or data.frame.
The class should have a good enough show method so that you wouldn't need to use View.
Regards,
Marcel
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written 3 months ago by
Marcel Ramos ♦♦ 50
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Answer:
A: seqlm installation error
... Hi niutster,
A couple of points:
If you are using Bioconductor, the recommended way to install a github package is `BiocInstaller::biocLite("raivokolde/seqlm")`.
Since this package is not part of Bioconductor, we can't provide support with any issues that may arise from it.
I tried to ins ...
written 5 months ago by
Marcel Ramos ♦♦ 50
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... Hi,
There are several ways you can check and format your code as suggested in BiocCheck.
These include:
goodpractice::gp (checker function - MangoTheCat/goodpractice github repository)
lintr (checker package)
formatR (text formatting package)
RStudio settings (best used when writing)
You ...
written 8 months ago by
Marcel Ramos ♦♦ 50
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Comment:
C: Issue of clusterprofiler package
... Hi,
Generally, the maintainer is reponsive on GitHub. He should also respond here.
You can create an issue at github.com/guangchuangyu/clusterprofiler/issues just to make sure he is aware.
Regards,
Marcel
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written 8 months ago by
Marcel Ramos ♦♦ 50
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... Hi,
Generally, the maintainer is reponsive on GitHub. He should also respond here.
You can create an issue at github.com/guangchuangyu/clusterprofiler/issues just to make sure he is aware.
Regards,
Marcel
...
written 8 months ago by
Marcel Ramos ♦♦ 50
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Answer:
A: "ALL" package under biocLite
... Hi Fakhrul,
Note: In the future please provide any error messages in English.
It seems to be an issue with the mapping of your network drive. The message says that UNC paths are not supported. Please map the network drive to something that is recognizable by R (i.e., "E:\path\to\folder\" ). You ...
written 8 months ago by
Marcel Ramos ♦♦ 50
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... Hi clausdkuhn,
Please see ?Biostrings::matchPWM for more details.
Regards,
Marcel
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written 8 months ago by
Marcel Ramos ♦♦ 50
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... It looks like you're registered.
This shouldn't be an error. Have you updated your BiocCheck?
https://support.bioconductor.org/api/email/david.a.quigley%40gmail.com/
...
written 8 months ago by
Marcel Ramos ♦♦ 50
Latest awards to Marcel Ramos
Scholar
3 months ago,
created an answer that has been accepted.
For A: Classes and methods for working with segmented copy number data
Scholar
3 months ago,
created an answer that has been accepted.
For A: Classes and methods for working with segmented copy number data
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