User: nw328

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nw32810
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United States
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4 years, 2 months ago
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4 years, 2 months ago
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n****@georgetown.edu

Posts by nw328

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Comment: C: Undertanding how DESeq2 handles multiple test conditions
... Hi Gordon, Thanks so much, I accidentally double-posted!   ...
written 4.2 years ago by nw32810
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(Closed) Undertanding how DESeq2 handles multiple test conditions
... Hi, After browsing through many of the posts on biostars, seqanswers etc, I still am a bit shaky on how best to handle multiple treatments with DESeq2.  I understand that the analysis takes the condition into account during the creation of the deseqDataSet object via the design argument, but how is ...
rnaseq deseq2 R written 4.2 years ago by nw32810
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Undertanding how DESeq2 handles multiple test conditions
... Hi, After browsing through many of the posts on biostars, seqanswers etc, I still am a bit shaky on how best to handle multiple treatments with DESeq2.  I understand that the analysis takes the condition into account during the creation of the deseqDataSet object via the design argument, but how is ...
rnaseq deseq2 R written 4.2 years ago by nw32810 • updated 4.2 years ago by Ryan C. Thompson7.2k
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Integrating DESeq2 and TopGO for Enrichment
... Hello, I'm a new (<4months) R user working in an academic lab, and trying to do some RNAseq analysis for an experiment.  I am using DESeq2 to compare expression levels. What is the best way to integrate a DESeqDataSet with TopGO or another gene ontology enrichment package? After creating the DE ...
rnaseq go deseq2 R written 4.2 years ago by nw32810 • updated 4.2 years ago by Bernd Klaus540

Latest awards to nw328

Popular Question 4.2 years ago, created a question with more than 1,000 views. For Undertanding how DESeq2 handles multiple test conditions
Popular Question 4.2 years ago, created a question with more than 1,000 views. For Integrating DESeq2 and TopGO for Enrichment

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