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New User
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USA
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1 year, 7 months ago
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4 years, 2 months ago
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j***********@abbvie.com

useR since 1999 but with a new user name for the updated site.

<prev • 8 results • page 1 of 1 • next >
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... I just came across this thread, and I don't mean to resurrect this epic debate, but I did want to applaud Mike, Ryan, and Jim for their patience and clarity in this thread. There are so many roads they could have taken, but they took the high road. Perfect example of the high quality community that ...
written 19 months ago by Wade Davis60
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... I would willing to put effort into this (along with others in my group) if we can get some of the underlying code, particularly the "advanced method" which is only available in the online calculator.   Wade ...
written 2.4 years ago by Wade Davis60
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... Update: If I just call load(wateRmelon) I still get the error. For now, I am going to just construct a new methyLumiSet object and proceed. Thanks for the time you spent looking into it.   ...
written 2.5 years ago by Wade Davis60
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... Interesting about the names producing that, but I don't think it is caused by NAs in my data: any(is.na(colnames(betas(melon.LumiSet.norm)))) [1] FALSE any(is.na(colnames(norm$beta))) [1] FALSE any(is.na(rownames(betas(melon.LumiSet.norm)))) [1] FALSE any(is.na(rownames(norm$beta))) [1] FALSE I ...
written 2.5 years ago by Wade Davis60
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... Hi Tyler, Thanks for the quick reply and suggestion. I have tried that and the problem still exists when you attempt to replace any of the data in the slots using '<-'. See below for a trivial case in the next to last line where I just take the data and add zero to it, and attempt to replace it ...
written 2.5 years ago by Wade Davis60
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... I have been a regular user of the wateRmelon package since its inception, and have encountered new errors with wateRmelon_1.18.0. I was wondering if anyone has run into the same issue. Normalization using dasen() on the new Illumina EPIC chips (aka 850K) gives the following error: dasen(melon.Lumi ...
written 2.5 years ago by Wade Davis60
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776
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written 4.2 years ago by Wade Davis60
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... Does anyone have a solution using either hwriter or ReportingTools such that by default the links in the HTML open in a new tab or window when selected? Looking at hwrite(), it seems that if the "target" attribute was available as optional argument, I could pass it the value "_blank" and that would ...
written 4.2 years ago by Wade Davis60

#### Latest awards to Wade Davis

Good Answer 2.3 years ago, created an answer that was upvoted at least 5 times. For A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
Teacher 2.3 years ago, created an answer with at least 3 up-votes. For A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?

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