User: duncp92

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duncp9220
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3 years, 10 months ago
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3 years, 11 months ago
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Posts by duncp92

<prev • 4 results • page 1 of 1 • next >
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Comment: C: How to find TF binding sites for particular TF's within +- 1000 bases of gene TS
... Hey H., Fantastic! Thanks for the help. With this I was able to create the gene sets I'm interested in.  -Duncan ...
written 4.0 years ago by duncp9220
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Comment: C: How to find TF binding sites for particular TF's within +- 1000 bases of gene TS
... Hey H., Fantastic! Thanks for the help. With this I was able to create the gene sets I'm interested in.  -Duncan ...
written 4.0 years ago by duncp9220
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Answer: A: How to find TF binding sites for particular TF's within +- 1000 bases of gene TS
...   Paul, Thanks for the response. I had looked through that but reviewed it and now the steps have become more clear to me. What's interesting is that through the method listed there I get about 151 hits for my TF of interest, but another method I tried gave me 88. Here are those steps. human_prom ...
written 4.0 years ago by duncp9220
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How to find TF binding sites for particular TF's within +- 1000 bases of gene TSS for all genes in human genome?
... Hello, I'm new to Bioconductor and Biostrings and would greatly appreciate any help with the task I'm trying to complete. I'd like to identify potential transcription factor binding sites for a few transcription factors using a position weight matrix representing the TF's binding motifs. I want to ...

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