User: katherine.beaulieu14

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Posts by katherine.beaulieu14

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Help with implementing kTSP algorithm in MATLAB
... Hi there, I am trying to implement the kTSP algorithm defined in the switchBox package, in matlab but am having some trouble seeing the appropriate source code in R. What source files are used for this algorithm? Right now I have implemented the scoring of the gene pairs (all possible combinations) ...
matlab ktsp switchbox tsp written 4.3 years ago by katherine.beaulieu140 • updated 4.3 years ago by marchion0
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TMM Manual Calculation to be used in MATLAB on miRNA count data
... Hi there, I was just recently asked to review some normalization techniques for miRNA data but I haven't really worked with R much (don't really understand what is going on in the calcNormFactors function) and I am only a second year undergrad student so I am a little lost when it comes to reading ...
edger calcnormfactors matlab tmm written 4.4 years ago by katherine.beaulieu140 • updated 4.4 years ago by Gordon Smyth39k

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Popular Question 4.3 years ago, created a question with more than 1,000 views. For TMM Manual Calculation to be used in MATLAB on miRNA count data

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