User: Rohit Ghai

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Rohit Ghai80
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12 years, 9 months ago
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13 years, 5 months ago
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r*********@mikrobio.med.uni-giessen.de

Posts by Rohit Ghai

<prev • 7 results • page 1 of 1 • next >
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Automated blasting of short nucleotide sequences against each other
... Ken Doing a blast of 500 sequences against a database of 500 sequences is not a big job. you hardly need a script for that. And if you want tabular output from BLAST consider using the "-m 8" option and get a nice tabular output. hope this helps Rohit Ken, Actually, if you think about how blast ...
probe written 12.8 years ago by Rohit Ghai80
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GenomeViz again : corrected link
... Dear Bioconductor list users This is for all of you who are interested in plotting data from microbial genomes on circular genome plots. It is possible to plot classification-style data or numerical data from microarrays, proteomics or computational methods. GenomeViz is free for all academic user ...
proteomics genomes written 12.8 years ago by Rohit Ghai80 • updated 12.8 years ago by A.J. Rossini210
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GenomeViz
... Dear Bioconductor list users This is for all of you who are interested in plotting data from microbial genomes on circular genome plots. It is possible to plot classification-style data or numerical data from microarrays, proteomics or computational methods. GenomeViz is free for all academic user ...
proteomics genomes written 12.8 years ago by Rohit Ghai80 • updated 21 months ago by xianxiu0
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vsn vs quantiles, bimodal data
... Dear all I have a few questions on comparing vsn and quantile normalization. It would be really great to have some thoughts from the mailing list. To begin with, are there any special criteria on how to deal with expression data that is somewhat bimodally distributed ? We have single-channel codel ...
normalization vsn codelink written 13.3 years ago by Rohit Ghai80
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Answer: A: OT: cell lines and tissues
... An HTML attachment was scrubbed... URL: https://www.stat.math.ethz.ch/pipermail/bioconductor/attachments/ 20040707/06f44f13/attachment.html ...
written 13.4 years ago by Rohit Ghai80
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OT: cell lines and tissues
... hi Stefan I feel that such comparisons would not offer as much contrast and clarity. Normal tissues would be best, even if isolation is tedious. Cell lines grow in a completely different environment than tissues. Gene expression is critically dependent on outside cues from other cells in the tissue ...
ovarian written 13.4 years ago by Rohit Ghai80 • updated 13.4 years ago by YUK FAI LEUNG140
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Error Installing Rgraphviz
... An HTML attachment was scrubbed... URL: https://www.stat.math.ethz.ch/pipermail/bioconductor/attachments/ 20040622/4d8b7fd6/attachment.html ...
written 13.4 years ago by Rohit Ghai80 • updated 13.4 years ago by Jeff Gentry3.9k

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