User: srinadee

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srinadee0
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Posts by srinadee

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Comment: C: Reading nested tags in SBML with SBMLR (R package)
... Thank you very much for the reply. The actual file is very large and it contains nearly 3000 reactions. Even though there is no direct mapping I think it get the tag names in order. I can merge them easily. Initially I tried using rsbml but it gave me an error saying the format of the file is wrong. ...
written 4.5 years ago by srinadee0
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Reading nested tags in SBML with SBMLR (R package)
... Hello, I have a SBML file. I want to create a tale including the ReactionID, Reaction Name, Reactant Species and Gene Association. Below is the structure of one reaction. <reaction id="R_DM_4CRSOL" name="Sink needed to allow p-Cresol to leave system" reversible="false">         <notes> ...
R sbml sbmlr written 4.5 years ago by srinadee0 • updated 4.5 years ago by radivot20
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Unable to read SBML file in rsbml
... Hello, I'm trying to read an SBML file using  rsbml and read the values of the nested tags. Below is the code I executed.     library(rsbml)     sFile = rsbml_read("Sample.xml") But I get the below error. Error: The units of the 'math' formula in a <kineticLaw> definition are expected to b ...
rsbml sbml written 4.5 years ago by srinadee0 • updated 4.5 years ago by Michael Lawrence11k

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