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Posts by kielpinski
... Dear Malcolm, Just to warn future users: getSeqHardMasked is not strand aware. ...
... Dear All, I am trying to figure out how to use the masked BSgenome object - I want to enable ALL masks. Following help for "bsapply" I tried: library(BSgenome.Hsapiens.UCSC.hg19.masked) hg19 <- BSgenome.Hsapiens.UCSC.hg19.masked param <- new("BSParams", X = hg19) param@maskList <- c(AGA ...
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