User: elisa.micarelli

Reputation:
10
Status:
New User
Location:
European Union
Last seen:
1 year ago
Joined:
4 years, 1 month ago
Email:
e**************@gmail.com

Posts by elisa.micarelli

<prev • 8 results • page 1 of 1 • next >
0
votes
1
answer
2.5k
views
1
answers
Comment: C: Limma LogFC hand calculation
... Thanks for your quick reply and explanation. ...
written 12 months ago by elisa.micarelli10
0
votes
1
answer
2.5k
views
1
answers
Comment: C: Limma LogFC hand calculation
... Hi,  I have a doubt, the fold change is defined by the following formula: FC = mean(condition_A_replicates)n/ mean(control_replicates)n    N : number of replicates where the replicate expression values are not log2-transformed and the final FC value is log2-transformed to make more readable the ...
written 12 months ago by elisa.micarelli10 • updated 12 months ago by Gordon Smyth38k
0
votes
0
answers
361
views
0
answers
brnn package (Bayesian regularization for feed-forward neural networks)
... Hi, I'm using the "brnn" package (Bayesian Regularized Neural Networks), in particular I run the train() function from caret package. My data are stored in a data.frame object and I run the caret function using the "formula" way y ~. (in the "point" there are seven variables that we can call here x ...
R caret machine learning brnn written 15 months ago by elisa.micarelli10
0
votes
0
answers
505
views
0
answers
output of propOB function ChemmineR
... Hi,  I'm using the package ChemmineR and in particular I'm getting the Open Babel properties by propOB function, that should to generate the following descriptors  'abonds',  'atoms', 'bonds', 'dbonds', 'HBA1', 'HBA2', 'HBD', 'logP', 'MR',  'MW', 'nF', 'sbonds', 'tbonds', 'TPSA' as mentioned in hel ...
chemminer chemmineob chemminetools drug written 2.6 years ago by elisa.micarelli10
0
votes
1
answer
877
views
1
answers
Comment: C: Error during installation of ChemmineOB R package
... Thanks I solved in this way!!!! ...
written 3.4 years ago by elisa.micarelli10
2
votes
1
answer
877
views
1
answer
Error during installation of ChemmineOB R package
... Hi,  I'm trying to install the ChemmineOB packages following this tutorial https://www.bioconductor.org/packages/3.3/bioc/vignettes/ChemmineOB/inst/doc/ChemmineOB.html the installation by direct command in R software  [ source("http://bioconductor.org/biocLite.R") biocLite("ChemmineOB") ] return ...
openbabel ubuntu chemmine written 3.4 years ago by elisa.micarelli10 • updated 3.4 years ago by Thomas Girke1.7k
0
votes
1
answer
2.8k
views
1
answers
Comment: C: explanation of makeContrasts function of limma package
... Thanks for your answer and advices. I take in account your suggestions and now I'm going to try to do an ANOVA-like comparisons, but before to ask you any possible questions I must read better the manual and reflect on comparisons that I should do. Thanks a lot. ...
written 4.1 years ago by elisa.micarelli10
1
vote
1
answer
2.8k
views
1
answer
explanation of makeContrasts function of limma package
... Hi, even at this stage, I want to thank anyone will can help me. I'm using the Limma package in order to anlayse the gene expression in different tissues(Sample). For each tissue I want to know which genes are overexpressed and underexpressed; for example I would be able to say that the gene_x is ...
geneexpression microarray limma R written 4.1 years ago by elisa.micarelli10 • updated 4.1 years ago by Aaron Lun24k

Latest awards to elisa.micarelli

Popular Question 2.5 years ago, created a question with more than 1,000 views. For explanation of makeContrasts function of limma package

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 266 users visited in the last hour