User: pau.puigdevall
pau.puigdevall • 0
- Reputation:
- 0
- Status:
- New User
- Last seen:
- 4 years, 2 months ago
- Joined:
- 4 years, 2 months ago
- Email:
- p*************@upf.edu
Profile information, website and location are not shown for new users.
This helps us discourage the inappropriate use of our site.
Posts by pau.puigdevall
<prev
• 4 results •
page 1 of 1 •
next >
0
votes
2
answers
829
views
2
answers
... Thanks Martin!! And it is even more efficient that I expected.
...
written 4.2 years ago by
pau.puigdevall • 0
0
votes
1
answer
870
views
1
answer
... I am working with the filterVcf() function of the VariantAnnotation package.
My goal is filtering variants by selecting SNVs that matches some genomic coordinates by passing the functions isSNV() and ScanVcfParam() as respective filters and param arguments. I have followed the tutorial of Lawrence ...
written 4.2 years ago by
pau.puigdevall • 0
• updated
4.2 years ago by
Martin Morgan ♦♦ 23k
0
votes
2
answers
829
views
2
answers
... Thanks Michael!! With the update now seems that the isSNV argument is working perfectly!
However, I'm just stacked again with this function. My goal by using this function is also to filter both with the SNVs and also by specifying genomic coordinates with the param argument using the ScanVcfParam. ...
written 4.2 years ago by
pau.puigdevall • 0
• updated
4.2 years ago by
Martin Morgan ♦♦ 23k
3
votes
2
answers
829
views
2
answers
...
Hello,
I would like to filter one vcf by selecting only SNVs and in addition, those that only match genomic coordinates of a provided GRanges. I know that the filterVcf() function of Variant Annotation can deal with those requirements by using the isSNV() function on filters and by selecting on pa ...
written 4.2 years ago by
pau.puigdevall • 0
Latest awards to pau.puigdevall
No awards yet. Soon to come :-)
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 16.09
Traffic: 121 users visited in the last hour