User: MarcinKosiński

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Location:
Poland
Website:
https://github.com/Mar...
Last seen:
1 month, 3 weeks ago
Joined:
3 years ago
Email:
m***********@gmail.com

Marcin Kosiński is a master student in Mathematical Statistics and Data Analysis specialty and is working in the Research and Development Department at the biggest polish news web portal, wp.pl (Virtual Poland Group). Challenges seeker and big R package enthusiast. Currently working in the field of large-scale online learning and various approaches to personalized news article recommendation. Co-organizer of the +350 members R Enthusiasts meetups in Warsaw. Interested in R packages development and survival analysis models. He worked as a subject matter expert at +2000 members Data Crunchers Online R Course at The Warsaw School of Data Analysis.

Posts by MarcinKosiński

<prev • 13 results • page 1 of 2 • next >
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Comment: C: RTCGA survival package Breast cancer subtypes
... Is there a way to download sub-type dependency with the bcr_patient_barcode ? If yes, then one can join this to BRCA.clinical with dplyr::left_join ...
written 7 weeks ago by MarcinKosiński0
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Comment: C: RTCGA survival package Breast cancer subtypes
... @giulia_m is any column name meaningful if you run colnames(BRCA.clinical) then you can specify extract.cols in survivalTCGA . You can try using  lapply(BRCA.clinical, function(x) {any(grepl('lum', tolower(x)))}) -&gt; is_there_luminal which(unlist(is_there_luminal)) do detect whether any vari ...
written 7 weeks ago by MarcinKosiński0
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Comment: C: RTCGA survival package Breast cancer subtypes
... Hello @giulia_m , can you provide the code, so we can update it with your request? ...
written 7 weeks ago by MarcinKosiński0
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Comment: C: Differences between RTCGA and TCGAbiolinks data
... 20160128 are only on GitHub. I had no power and energy to transfer them to the Bioconductor ready format https://github.com/RTCGA ...
written 8 weeks ago by MarcinKosiński0
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Comment: C: Differences between RTCGA and TCGAbiolinks data
... Dear @Levi Waldron. Please don't missname RTCGA with RTCGAToolbox. Those are two various packages. Best. ...
written 9 weeks ago by MarcinKosiński0
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Comment: C: Conference: BioC 2016: Where Software and Biology Connect, Stanford, 24-26 June
... Thanks. I hope I'll manage that. There are few interesting advanced workshops to attend :) ...
written 2.1 years ago by MarcinKosiński0
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Comment: C: Conference: BioC 2016: Where Software and Biology Connect, Stanford, 24-26 June
... Is there any workshop registration or I can attend any workshop I choose? ...
written 2.1 years ago by MarcinKosiński0
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Is there a way to change the name of R package that is already published on bioconductor?
... I have published `RTCGA.rnaseq` R package that provides datasets from TCGA project containig RNA sequencing (gene's expressions). I am wondering if there is a way to change this package name to be more proper like `RTCGA.RNAseq` and if that's possible, how should I do that and to whom should I write ...
R developers devel written 2.7 years ago by MarcinKosiński0 • updated 2.7 years ago by Martin Morgan ♦♦ 22k
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Comment: C: Are there any bioconductor github mirrors for data packages?
... Is there a way to synchronize data package github repo with bioconductor's svn repo? ...
written 2.8 years ago by MarcinKosiński0
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Are there any bioconductor github mirrors for data packages?
... I am an R software developer publishing my packages on bioconductor. Since bioconductor software developmnet requires SVN for code versioning I had to move my contribution from GitHub to bioconductor's SVN. Now I am trying (after this information https://www.bioconductor.org/developers/how-to/git-mi ...
R software bioc-devel developers written 2.8 years ago by MarcinKosiński0 • updated 2.8 years ago by Dan Tenenbaum ♦♦ 8.2k

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Popular Question 2.1 years ago, created a question with more than 1,000 views. For Can't install package because of sp package
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