User: micaela.polay

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Posts by micaela.polay

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Answer: A: DEXSeq: question about usage coefficient and splicing plot
... Thanks a lot for your very quick answer Alejandro! Makes more sense now. Is it possible to know why did you choose to plot values without VST? If I understand correctly, VST uses dispersion values computed by estimateDispersions function. Wouldn't it be more accurate to plot these values? ...
written 4.3 years ago by micaela.polay0
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Answer: A: DEXSeq: question about usage coefficient and splicing plot
... Hello, I'm very interested in this question. I understand that the exon coefficient is like the NI (Normalized Intensity) in exon microarrays analysis, that is to say the exon inclusion normalized by overall gene expression. If I refer to DEXSeq vignette, the exon usage represented in "splicing" vi ...
written 4.3 years ago by micaela.polay0

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