User: sergisayolspuig

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Germany
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Posts by sergisayolspuig

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Job: Bioinformatician/Bioinformatics position, IMB Mainz, Germany
... The Institute of Molecular Biology gGmbH (IMB) is a Centre of Excellence for Life Sciences funded by the Boehringer Ingelheim Foundation and located within the campus of the University of Mainz in Germany. IMB focuses on epigenetics, DNA repair and developmental biology and offers premium scientific ...
job bioinformatics germany written 3 days ago by sergisayolspuig40
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Job: Bioinformatician/Bioinformatics position, IMB Mainz, Germany
... Development of cell type-specific viral vectors for gene targeting Brain tissue is characterized by its complex composition of a multitude of cell types ranging from different neuronal types to glia and epithelial cells. The difficulty to manipulate the various cell types specifically and independe ...
job bioinformatics germany written 8 weeks ago by sergisayolspuig40
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Comment: C: Gviz: plotting multiple custom tracks or adding panel legend at the top
... The answer when you rm(i) before plotTracks() Actually you were almost there ;-)  Make use of CustomTrack class' variables slot: ctracks <- list() for (i in 1:2) { ctracks[[i]] <- CustomTrack(plottingFunction=function(GdObject, prepare, ...) { if(!prepare) grid.text(paste(GdObje ...
written 11 months ago by sergisayolspuig40
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Job: Bioinformatician/Bioinformatics position, IMB Mainz, Germany
... Bioinformatician (m/f) (#CFBIO10) The Institute of Molecular Biology gGmbH (IMB) is a Centre of Excellence for Life Sciences funded by the Boehringer Ingelheim Foundation and located within the campus of the University of Mainz in Germany. IMB focuses on epigenetics, DNA repair and developmental bi ...
job bioinformatics germany written 12 months ago by sergisayolspuig40
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Answer: A: dupRadar parameter for single-end RNA-Seq data
... Hi Gary, the accompanying comment is a misguided attempt to define what the parameter expects. Please ignore the comment (or add a question mark at the end), and proceed as the common sense suggests: PAIRED <- TRUE  # the library is paired end PAIRED <- FALSE # the library is single end ch ...
written 12 months ago by sergisayolspuig40
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Answer: A: DupRadar and Picard2.6.0
... Right, currently dupRadar works only with the "old" versions of Picard where the tools were still spread as independant .jar files. I'll patch it for the next release (**EDIT: Bioconductor 3.5**). cheers, Sergi ...
written 12 months ago by sergisayolspuig40
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TDARACNE:::ToTheGraph_timeShiftmax2 doesn't support more than 1000 edges
... Hi, the function ToTheGraph_timeShiftmax2 to get a DOT graph has the maximum number of edges hardcoded: R> TDARACNE:::ToTheGraph_timeShiftmax2 function (network, name) {     row <- dim(network)[1]     col <- dim(network)[2]     title2 <- name     graph <- array(0, dim = c(1000, 4)) ...
software error tdaracne written 2.0 years ago by sergisayolspuig40 • updated 2.0 years ago by zoppoli pietro10

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