User: Michaela.Fuchs

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Posts by Michaela.Fuchs

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.DTT file Affymetrix
... Hello, my lab had an Affymetrix microarry done for some samples last year. What we got from the company that did them was an exel file with the differentialy expressed genes, the CEL files, jpg of the CEL files and a  .DTT file under the header Raw Data. The acompaning report said the DTT could be ...
microarray analysis affymetrix microarrays written 4.2 years ago by Michaela.Fuchs0 • updated 4.2 years ago by Guido Hooiveld2.5k
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Comment: C: Annotation for a MoGene-2_0-st Chip/Arry Data
... Thank you so much! It worked nicely. A further question would be if there is a way to put the gene names along with the sample into a heatmap. The heatmap itself is not really a problem, I get it with ------ heatmap(exprs(eset)[selected,],col=gentlecol(256), cexCol =1, cexRow= 0.25) ## for examp ...
written 4.2 years ago by Michaela.Fuchs0
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Annotation for a MoGene-2_0-st Chip/Arry Data
... Hello to you all, I'm very new to the whole process of microarry analysis via R/Bioconductor. I had a course in R and microanalysis, but it worked only on the ALL sample package for affy. So everything on getting the right packages and the data to the point where I can start the acuall analysis is ...

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