User: abhinavbn

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abhinavbn0
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Posts by abhinavbn

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Comment: C: Gene Symbol with Pathview
... Thank you for the explanation!! ...
written 2.1 years ago by abhinavbn0
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Comment: C: Gene Symbol with Pathview
... Thank you for quick reply!! yes,I added "max" in my case but i still see HDAC1 name in the KEGG graph box having the HDAC2 max value.I understand that node.sum is looking for "max" value when they have multiple genes but they don't print the gene name that has max value. ...
written 2.1 years ago by abhinavbn0
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Answer: A: Gene Symbol with Pathview
... Thank you for quick reply!! yes,I added "max" in my case but i still see HDAC1 name in the KEGG graph box having the HDAC2 max value.I understand that node.sum is looking for "max" value when they have multiple genes but they don't print the gene name that has max value. ...
written 2.1 years ago by abhinavbn0
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Gene Symbol with Pathview
... I applied “Pathview” to overlay my gene expression data with a KEGG pathway (hsa05200). In this pathway, there are significant amount of genes and It seems one gene symbol on the graph can represent many genes. For instance, if i move cursor over “HDAC” on the graph, 2 gene symbols pop up (e.g HDAC1 ...
visualization pathview bioconductor kegg written 2.1 years ago by abhinavbn0 • updated 2.1 years ago by Luo Weijun1.4k

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