User: mertes

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mertes0
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Comment: C: BiocParallel example does not work any more (sbatch produced exit code 1)
... Hello Valerie, thx for the reply. Since I just copied and pasted the vignette from BiocParallel I didnt thought about an error in there. The vignette shows the ntasks in the slurm.tmpl file, but does not specify it in the R command. this is in the r-centric section of biocparallel (4.3.2, Introduc ...
written 3.8 years ago by mertes0
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BiocParallel example does not work any more (sbatch produced exit code 1)
... Hey, since we upgraded our slurm to the version 15.08.3 the Biocparallel package does not work any more. When running the example code `xx <- bplapply(1:100, FUN)` from the vignette it fails with the following error: Error in (function (reg, ids, resources = list(), wait, max.retries = 10L,  : ...
biocparallel slurm written 3.8 years ago by mertes0 • updated 3.8 years ago by Valerie Obenchain6.7k

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Popular Question 3.8 years ago, created a question with more than 1,000 views. For BiocParallel example does not work any more (sbatch produced exit code 1)

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