User: Owen.Leiser

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Posts by Owen.Leiser

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Answer: A: MSGFgui tries to locate MSGF.zip from a nonexistent UCSC source
... I don't know much about the dependencies for MSGFgui - could it be an mzR problem? MSGFgui complains when I load its library that: In fun(libname, pkgname) : mzR has been built against a different Rcpp version (0.12.1) than is installed on your system (0.12.2). This might lead to errors when loa ...
written 3.8 years ago by Owen.Leiser0
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Answer: A: MSGFgui tries to locate MSGF.zip from a nonexistent UCSC source
... OK, an update: The above fix that Thomas posted (thanks Thomas) got MSGFgui to "see" the symlink to the MSGFPlus.jar file in another directory. I think there's now a problem with Shiny (the error message below returns some Google hits to this program): MS-GF+ Beta (v9517) (4/10/2013) Loading datab ...
written 3.8 years ago by Owen.Leiser0
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Answer: A: MSGFgui tries to locate MSGF.zip from a nonexistent UCSC source
... Thanks for the advice! It's always nice to ask a question, go to bed, and wake up to an answer. I'll keep an eye out on GitHub for an update. ...
written 3.8 years ago by Owen.Leiser0
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MSGFgui tries to locate MSGF.zip from a nonexistent UCSC source
... Hello everyone, I recently came across the MSGFgui packages for R (https://github.com/thomasp85/MSGFgui). I use command-line MS-GF+ regularly, but would like to utilize the visualization in the GUI. This is perhaps a long post, but please bear with me. In R 3.2.3, I have installed MSGFplus and MSGF ...
software error msgfplus msgfgui written 3.8 years ago by Owen.Leiser0

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