User: maedakus

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maedakus10
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8 months, 2 weeks ago
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1 year, 4 months ago
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m*******@chugai-pharm.co.jp

Posts by maedakus

<prev • 43 results • page 1 of 5 • next >
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Rsamtools packages error
... Hi, i am very new to NGS analysis, so now i am learning how to use Rsamtools pakcages with "An introduction to Rsamtools" documents. however, while i was just following the Rsamtools documents, i got an error as below. if you know how to solve this, would you mind telling me ? Section : 3.1 Asse ...
an introduction to rsamtools written 9 months ago by maedakus10 • updated 9 months ago by Martin Morgan ♦♦ 19k
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Comment: C: seqinr package - choosebank() function not connecting
... Thank you so much ! ...
written 9 months ago by maedakus10
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Comment: C: seqinr package - choosebank() function not connecting
... hi, i am now thinking to use that R package, actually seqinr is not a biocondcutor, even if it looks like Biocondcutor. i also have same problem as above and sent an email to the package author ,but no response yet. i think that problem is due to the Fire wall setting in the comapny security. Fi ...
written 9 months ago by maedakus10
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Comment: C: Fusion gene mutation detection
... thank you so much for telling me about chimera package. ...
written 9 months ago by maedakus10
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Fusion gene mutation detection
... Hi, all reagrding the alternative splicing variant detection, i think QuasR package is the best way as of now, however, i dont know what is best analysis package of biocondcutor for detection of fusion gene mutation(eg. ALK) . if you know the best practice of analysis for detection of fusion gene ...
quasr bioconductor written 9 months ago by maedakus10
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Comment: C: TCGA biolinks data download
... dear tiago, thank you so much for telling me , i am looking forwards to using new TCGAbiolinks.   ...
written 10 months ago by maedakus10
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Comment: C: TCGA biolinks data download
... thank you so much for telling me , i will try again after the recovery of database. ...
written 10 months ago by maedakus10
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TCGAdownload failure < invalid multibyte string >
... Hi, all i am very new to bioconductor. i just started from this year. when i followed the tutorial of TCGAbiolonks. as below https://www.bioconductor.org/packages/release/bioc/vignettes/TCGAbiolinks/inst/doc/tcgaBiolinks.html TCGAdownload(data = datQuery,              path = pathCancer,          ...
tcgadownload written 10 months ago by maedakus10
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TCGA biolinks data download
... Hi, when downloading data from TCGA dabase using Biolinks, i got an error as below. if you know how to solve this, would you mind telling me ? thanks in advance !   TCGAdownload(data = datQuery2, path = "D:/...../TCGA database", type = dataType, samples = ...
tcgabiolinks written 10 months ago by maedakus10 • updated 10 months ago by tiagochst80
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Comment: C: Ensembl identifiers mapping to Gene Symbol
... thank you so much ...
written 10 months ago by maedakus10

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