User: sjs0282

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sjs02820
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Posts by sjs0282

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PlotMA Filters for DeSEQ2 ; adjusting script
... I'm trying to get a mean expression plot, where only genes that are + - 0.6 LFC, and have a padj <0.001 to be in red. I have tried the following 2-3 things, but don't know how to get a plot where only the genes that are greater than 0.6 LFC and less than padj<0.001 to be in red. I''ve checked ...
rnaseq deseq deseq2 rna-seq plotma written 3.1 years ago by sjs02820 • updated 3.1 years ago by Michael Love23k
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Comment: C: RNAseq Adjusting for Covariates?
... Thank you so much for your prompt response Michael. I'll look at DESeq2 and get back to you if I have any questions.  ...
written 3.2 years ago by sjs02820
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Comment: C: RNAseq Adjusting for Covariates?
... Thank you so much for your prompt response Michael. I'll look at DESeq2 and get back to you if I have any questions.  ...
written 3.2 years ago by sjs02820
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Comment: C: RNAseq Adjusting for Covariates?
... Thank you so much for your prompt response Michael. I'll look at DESeq2 and get back to you if I have any questions.  ...
written 3.2 years ago by sjs02820
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RNAseq Adjusting for Covariates?
... Hello Everyone, I'm very new to the RNAseq Field. I'm trying to adjust for Sex and Age within our Dataset. I have 11 case and 12 Control samples that we have generated RNA seq data for. We've used tophat and DESEQ for the analysis. However, our samples are post mortem human brain tissue and we woul ...
rnaseq deseq rna covariate adjustment written 3.2 years ago by sjs02820 • updated 3.2 years ago by Michael Love23k

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