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528
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Comment: Comment: Limma : paired samples leading to unexpected estimates
7 months ago Basti ▴ 780
2
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2
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528
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Limma : paired samples leading to unexpected estimates
limma
7 months ago Basti ▴ 780
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0
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780
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Comment: Comment: single excel file containing methylation beta values does not get loaded in ChAM
20 months ago Basti ▴ 780
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1.0k
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Comment: Comment: minfi::read.metharray.exp
22 months ago Basti ▴ 780
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2
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1.0k
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Answer: Answer: minfi::read.metharray.exp
22 months ago Basti ▴ 780
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1
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809
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Comment: Comment: Error in champ.load(): The following specified files do not exist
22 months ago Basti ▴ 780
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1
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3.1k
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Answer: Answer: geneList error in clusterprofiler
22 months ago Basti ▴ 780
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1
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2.3k
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Answer: Answer: Obtaining pheno data from CEL files
23 months ago Basti ▴ 780
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1
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1.8k
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Comment: Comment: EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
2.1 years ago Basti ▴ 780
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1.8k
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Comment: Comment: EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
2.1 years ago Basti ▴ 780
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0
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503
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IlluminaHumanMethylation27kanno.ilmn12.hg19 package is mapped to hg18 genome
IlluminaHumanMethylation27kanno.ilmn12.hg19
2.1 years ago Basti ▴ 780
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1
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2.7k
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Comment: Comment: RNAseq paired-sample differantial expression analysis with many samples
2.1 years ago Basti ▴ 780
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2.0k
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Comment: Comment: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
2.3 years ago Basti ▴ 780
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1
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2.0k
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Comment: Comment: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
2.3 years ago Basti ▴ 780
0
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0
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969
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Comment: Comment: Error in reading my csv file in minfi
2.3 years ago Basti ▴ 780
1
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0
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685
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Comment: Comment: Minimum datasets needed for meta analysis
2.3 years ago Basti ▴ 780
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1
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1.8k
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Comment: Comment: Methylation data analysis
2.3 years ago Basti ▴ 780
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3.0k
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Answer: Answer: Error when trying to create a heatmap with DESeq2
2.3 years ago Basti ▴ 780
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1
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809
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Comment: Comment: DESeq2: how could the lower mean abundance treatment show a positive and signifi
2.4 years ago Basti ▴ 780
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1.2k
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Comment: Comment: Comparing RNASeq data from multiple studies
2.4 years ago Basti ▴ 780
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0
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1.6k
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Comment: Comment: minfi bumphunter - probe IDs
2.4 years ago Basti ▴ 780
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1
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1.6k
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Answer: Answer: minfi bumphunter - probe IDs
2.4 years ago Basti ▴ 780
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0
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1.2k
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Answer: Answer: Create design matrix for differential methylation analysis
2.4 years ago Basti ▴ 780
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1
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1.4k
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Comment: Comment: DeSeq2 design fails (full model matrix is less than full rank)
2.4 years ago Basti ▴ 780
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2
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4.9k
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Comment: Comment: Error while preprocessing raw data from methylation array using minfi package
2.5 years ago Basti ▴ 780
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0
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848
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Answer: Answer: Model matrix not full rank
2.6 years ago Basti ▴ 780
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0
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1.1k
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Answer: Answer: library(topGO) query
2.6 years ago Basti ▴ 780
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2
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1.7k
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Comment: Comment: ChAMP trouble reading csv file
2.6 years ago Basti ▴ 780
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1
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1.5k
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Comment: Comment: Deseq2 Results are different using batch design
2.6 years ago Basti ▴ 780
0
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1
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4.2k
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Comment: Comment: Not able to install clusterProfiler
2.6 years ago Basti ▴ 780
0
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1
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1.9k
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Answer: Answer: Creating heatmaps with 2 Log Fold Changes in DESEQ2
2.6 years ago Basti ▴ 780
0
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0
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3.9k
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Comment: Comment: Error using champ.import
2.7 years ago Basti ▴ 780
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0
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2.1k
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Answer: Answer: DESeq2 design formula
2.7 years ago Basti ▴ 780
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0
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956
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Answer: Answer: plotCounts label each sample
2.7 years ago Basti ▴ 780
0
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1
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1.3k
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Comment: Comment: msa Installation failed - please help
2.8 years ago Basti ▴ 780
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0
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1.9k
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Comment: Comment: Batch correction using control probes in EPIC array data
2.8 years ago Basti ▴ 780
0
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0
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1.9k
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Comment: Comment: Batch correction using control probes in EPIC array data
2.8 years ago Basti ▴ 780
0
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0
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1.2k
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Comment: Comment: ageData (minfi pipeline)
2.8 years ago Basti ▴ 780
1
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1
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1.6k
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Answer: Answer: Problem in running DESeq from expected count data of Transcriptome by Trinity fo
2.8 years ago Basti ▴ 780
0
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0
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773
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Comment: Comment: Inverted log2foldchange in study?
2.9 years ago Basti ▴ 780
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1
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1.4k
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Comment: Comment: DRIMseq error for paired sample analysis
2.9 years ago Basti ▴ 780
0
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0
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1.0k
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Comment: Comment: How to extract proteins from PCs in plot_pca in DEP package
2.9 years ago Basti ▴ 780
0
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0
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875
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Answer: Answer: deseq2 nested multifactorial analysis
2.9 years ago Basti ▴ 780
0
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0
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671
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Comment: Comment: How to save primers in a local file with openPrimeR
3.0 years ago Basti ▴ 780
2
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0
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1.1k
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Comment: Comment: please resolve the issue
3.0 years ago Basti ▴ 780
1
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0
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1.9k
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Comment: Comment: No enriched GO terms CpGs
3.0 years ago Basti ▴ 780
1
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0
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1.9k
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Comment: Comment: No enriched GO terms CpGs
3.0 years ago Basti ▴ 780
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2
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1.9k
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Answer: Answer: No enriched GO terms CpGs
3.0 years ago Basti ▴ 780
1
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1
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5.7k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
3.0 years ago Basti ▴ 780
1
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0
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1.7k
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Answer: Answer: champ.load IDAT files from subdirectories
3.0 years ago Basti ▴ 780
239 results • Page 1 of 5
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