Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
0
votes
0
replies
3
views
Why does GSEA on edgeR results for randomized samples give highly significant p-values?
fgsea
edgeR
20 minutes ago
gene_bioconductor
▴ 10
0
votes
0
replies
7
views
NEED FOR NESSASORY HELP
RNASeqData
edgeR
59 minutes ago
z_bahari
• 0
0
votes
0
replies
9
views
Gene-by-sample covariates in limma
Metabolomics
limma
1 hour ago
c53aba27
• 0
0
votes
0
replies
8
views
flowStats for CyTOF
flowStats
2 hours ago
tholmes
• 0
0
votes
2
replies
31
views
DESeq2 v1.35.0
DESeq2
updated 2 hours ago by
Michael Love
41k • written 3 hours ago by
Espresso
• 0
0
votes
0
replies
13
views
DiffBind: no peaks in DBA object
DiffBind
macs2
chipseq
4 hours ago
yvonneh
• 0
0
votes
0
replies
12
views
How to create consensus peak sets for each group to use in DiffBind?
DiffBind
4 hours ago
Ian D.
▴ 70
0
votes
1
reply
26
views
Job:
Postdoctoral Position in Bioinformatics - Mainz, Germany
JobPosting
written 9 hours ago by
4r-rtg
• 0
0
votes
2
replies
81
views
More regions in union when increasing DBA$config$mergeOverlap
DiffBind
1 day ago • updated 4 hours ago
Ian D.
▴ 70
0
votes
1
reply
47
views
Deseq2 and Normalization of RNA sequencing data
DESeq2
updated 9 hours ago by
ATpoint
★ 4.1k • written 20 hours ago by
kcarey
• 0
0
votes
3
replies
89
views
Differences in differential analysis methods for RNA-Seq
DESeq2
StatisticalMethod
Proteomics
DifferentialExpression
RNASeq
updated 9 hours ago by
ATpoint
★ 4.1k • written 21 hours ago by
james.zhang20
• 0
0
votes
1
reply
93
views
Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call when trying to subset pheatmap
DESeq2
updated 22 hours ago by
ATpoint
★ 4.1k • written 23 hours ago by
angelathuynh5
• 0
3
votes
0
replies
39
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
23 hours ago
shepherl
3.9k
0
votes
0
replies
54
views
Empty table plot using plotGseaTable()
fgsea
1 day ago • updated 22 hours ago
Chris
• 0
0
votes
3
replies
213
views
log2FoldChange value is way too different when compared with counts(dds)
DESeq2
updated 22 hours ago by
Michael Love
41k • written 1 day ago by
HAK
• 0
0
votes
2
replies
187
views
Get genomic coordinates of CpGs sites (chromosomes, genomic position)
GenomeWideAssociation
SequenceAnnotation
MethylationArray
GenomicDistributionsData
1 day ago • updated 18 hours ago
Yveto
• 0
0
votes
2
replies
149
views
limma-voom: Calculate the log-fold change in gene expression within a sample
limma
RNASeq
voom
written 9 days ago by
taur.vil
• 0
5
votes
6
replies
2.7k
views
Although I successfully installed the package "simpleaffy'' , I cannot library it. Why?
simpleaffy
updated 2 hours ago by
James W. MacDonald
65k • written 2.3 years ago by
yanchangjian2019
• 0
18 results • Page
1 of 1
Recent ...
Replies
Answer: DESeq2 v1.35.0
by
Michael Love
41k
That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…
Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i
by
James W. MacDonald
65k
Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.
Answer: DESeq2 v1.35.0
by
James W. MacDonald
65k
Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…
Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i
by
fatinataly
• 0
I tried also with oligo does not work, any other suggestion?
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
Awards
• All
Popular Question
to
gene_bioconductor
▴ 10
Popular Question
to
rohitsatyam102
▴ 20
Popular Question
to
shepherl
3.9k
Popular Question
to
siajunren
• 0
Scholar
to
Rory Stark
★ 5.2k
Locations
• All
United States,
5 minutes ago
European Union,
8 minutes ago
United States,
8 minutes ago
EMBL Heidelberg,
13 minutes ago
France,
14 minutes ago
Traffic: 795 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6