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Xiao
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aristotele_m
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written 6.6 years ago by
Russ Fraser
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Tutorial:
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updated 9 months ago by
Juan Pablo
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written 8.4 years ago by
raya.fai
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updated 12 weeks ago by
Michael Love
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written 7.9 years ago by
adesrichard
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updated 7 months ago by
Gordon Smyth
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written 5.3 years ago by
tleona3
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10
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Mingkee
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written 6.9 years ago by
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updated 2 days ago by
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written 6.7 years ago by
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9
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updated 5 months ago by
Gordon Smyth
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written 8.2 years ago by
Radek
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shepherl
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written 2.3 years ago by
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written 8.3 years ago by
tangming2005
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updated 10 months ago by
alexandresegers
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written 19 months ago by
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written 5 months ago by
Daniel E. Weeks
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updated 5 weeks ago by
Robert Castelo
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written 5 weeks ago by
Bine
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updated 11 weeks ago by
Gordon Smyth
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written 11 weeks ago by
Amit
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updated 11 months ago by
Rory Stark
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written 11 months ago by
Chris
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updated 7 months ago by
jd774
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written 4.8 years ago by
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updated 7 months ago by
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written 21 months ago by
Recep
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updated 19 hours ago by
Daniele
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written 5.5 years ago by
Guido Hooiveld
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updated 4 months ago by
Garrett
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written 6.2 years ago by
blastzone.heimerdinger
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updated 5 months ago by
Gordon Smyth
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written 5 months ago by
annikagable
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updated 7 months ago by
Ke
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written 2.0 years ago by
kieran.short
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updated 4 months ago by
Matthias Lienhard
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written 7.1 years ago by
justinburgener
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updated 3 months ago by
Gordon Smyth
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written 9.2 years ago by
Ryan C. Thompson
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481
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updated 8 weeks ago by
Gordon Smyth
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written 8 weeks ago by
Amit
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updated 10 months ago by
Michael Love
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written 10 months ago by
Kathleen Reed
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written 20.2 years ago by
Miroslava Cuperlovic-Culf
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updated 10 months ago by
James W. MacDonald
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written 7.8 years ago by
szenitha
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updated 8 months ago by
Gordon Smyth
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written 2.5 years ago by
David Lyon
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updated 9 months ago by
Erika
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written 9.3 years ago by
c.lieftink@nki.nl
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written 11 weeks ago by
Kim
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updated 6 months ago by
ATpoint
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written 7 months ago by
jonas.freimuth
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6
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updated 3 months ago by
Gordon Smyth
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written 3 months ago by
aa.machado001
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Recent ...
Replies
Answer: Numerical differences in DESeq2 output depending on different design matrix cons
by
Michael Love
42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs
by
Michael Love
42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub?
by
Daniele
•
0
Hi,
I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation.
Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★
1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
•
0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed.
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