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ASpli
•
reset
0
votes
0
replies
105
views
I am trying to detect alternative splicing.
ASpli
27 days ago
Sebashish
• 0
0
votes
0
replies
259
views
Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
11 weeks ago
vipul14
• 0
5
votes
6
replies
879
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 9 months ago by
Gordon Smyth
50k • written 9 months ago by
martin.grigorov
▴ 10
0
votes
1
reply
669
views
Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors
Aspli
updated 15 months ago by
Sophie
• 0 • written 15 months ago by
salvocomplicazioni1
• 0
0
votes
3
replies
3.4k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 8 months ago by
andresrabinovich
• 0 • written 19 months ago by
thithusuong.nguyen
• 0
0
votes
0
replies
622
views
ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli
alterna
AlternativeSplicing
2.3 years ago
hamza_karakurt
▴ 50
6
votes
10
replies
1.7k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 2.7 years ago by
Ines
• 0 • written 3.0 years ago by
Emma
▴ 20
0
votes
1
reply
1.6k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 22 months ago by
lincango_marco
• 0 • written 2.7 years ago by
Dmitri
• 0
1
vote
3
replies
1.0k
views
ASpli error message
ASpli
updated 2.3 years ago by
hamza_karakurt
▴ 50 • written 3.1 years ago by
stephen66
▴ 50
1
vote
11
replies
2.0k
views
Aspli: error with gbCounts
Aspli
ASpli
3.2 years ago • updated 3.1 years ago
jbono
▴ 10
0
votes
1
reply
810
views
ASpli package function plotGenomicRegions fails in windows
ASpli
plotGenomicRegions
updated 3.8 years ago by
emancini
▴ 50 • written 4.8 years ago by
mgdrnl
• 0
0
votes
1
reply
610
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.1 years ago
joanmarquez21
• 0
3
votes
2
replies
1.1k
views
ASpli readCounts never ends!
aspli
readCounts
rna-seq
alternative splicing
AS
5.3 years ago
fernandalpcosta
▴ 10
0
votes
0
replies
900
views
ASpli AsDiscover error
R
alternative splicing
ASpli
AsDiscover
5.4 years ago
abdul rawoof
▴ 60
0
votes
0
replies
959
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq
alternative splicing
ASpli
5.5 years ago
nicolas.guyon2
• 0
0
votes
0
replies
825
views
ASPLI (RNAseq AS) R package error
rnaseq
ASPLI
5.9 years ago
dina.hesham139
• 0
0
votes
0
replies
1.1k
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli
rstudio
5.9 years ago
arphatak
• 0
0
votes
1
reply
909
views
Splicing analysis with ASpli
ASpli
updated 6.2 years ago by
Dario Strbenac
★ 1.5k • written 6.2 years ago by
jovel_juan
▴ 30
2
votes
2
replies
1.4k
views
ASpli ERROR during the counting step
ASpli
rnaseq
updated 6.2 years ago by
hojka.anna
▴ 10 • written 6.5 years ago by
daniele.ottaviani
▴ 10
19 results • Page
1 of 1
Recent ...
Replies
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
JKim
• 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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Vincent J. Carey, Jr.
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Koen Van den Berge
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