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Aspli
•
reset
0
votes
0
replies
101
views
I am trying to detect alternative splicing.
ASpli
20 days ago
Sebashish
• 0
0
votes
0
replies
243
views
Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
10 weeks ago
vipul14
• 0
5
votes
6
replies
857
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 9 months ago by
Gordon Smyth
50k • written 9 months ago by
martin.grigorov
▴ 10
0
votes
1
reply
656
views
Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors
Aspli
updated 15 months ago by
Sophie
• 0 • written 15 months ago by
salvocomplicazioni1
• 0
0
votes
3
replies
3.4k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 7 months ago by
andresrabinovich
• 0 • written 19 months ago by
thithusuong.nguyen
• 0
0
votes
0
replies
614
views
ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli
alterna
AlternativeSplicing
2.2 years ago
hamza_karakurt
▴ 50
6
votes
10
replies
1.7k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 2.7 years ago by
Ines
• 0 • written 3.0 years ago by
Emma
▴ 20
0
votes
1
reply
1.6k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 21 months ago by
lincango_marco
• 0 • written 2.7 years ago by
Dmitri
• 0
1
vote
3
replies
1.0k
views
ASpli error message
ASpli
updated 2.3 years ago by
hamza_karakurt
▴ 50 • written 3.0 years ago by
stephen66
▴ 50
1
vote
11
replies
2.0k
views
Aspli: error with gbCounts
Aspli
ASpli
3.1 years ago
jbono
▴ 10
0
votes
1
reply
803
views
ASpli package function plotGenomicRegions fails in windows
ASpli
plotGenomicRegions
updated 3.7 years ago by
emancini
▴ 50 • written 4.8 years ago by
mgdrnl
• 0
0
votes
1
reply
595
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.0 years ago
joanmarquez21
• 0
3
votes
2
replies
1.0k
views
ASpli readCounts never ends!
aspli
readCounts
rna-seq
alternative splicing
AS
5.2 years ago
fernandalpcosta
▴ 10
0
votes
0
replies
899
views
ASpli AsDiscover error
R
alternative splicing
ASpli
AsDiscover
5.4 years ago
abdul rawoof
▴ 60
0
votes
0
replies
950
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq
alternative splicing
ASpli
5.5 years ago
nicolas.guyon2
• 0
0
votes
0
replies
818
views
ASPLI (RNAseq AS) R package error
rnaseq
ASPLI
5.9 years ago
dina.hesham139
• 0
0
votes
0
replies
1.0k
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli
rstudio
5.9 years ago
arphatak
• 0
0
votes
1
reply
898
views
Splicing analysis with ASpli
ASpli
updated 6.2 years ago by
Dario Strbenac
★ 1.5k • written 6.2 years ago by
jovel_juan
▴ 30
2
votes
2
replies
1.4k
views
ASpli ERROR during the counting step
ASpli
rnaseq
updated 6.2 years ago by
hojka.anna
▴ 10 • written 6.4 years ago by
daniele.ottaviani
▴ 10
19 results • Page
1 of 1
Recent ...
Replies
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Answer: Differential gene expression analysis results
by
ATpoint
★ 4.1k
Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.
Votes
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
Comment: deseq2 results
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