Showing : Epigenetics • reset
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Job: Bioinformatics Scientist position at Johns Hopkins
R USA Hopkins GI Cancer Epigenetics Job
8.2 years ago asharm37 • 0
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edgeR - multiple comparisions
Epigenetics GO edgeR Epigenetics GO edgeR
updated 13.0 years ago by ▴ 320 • written 13.0 years ago by ▴ 260
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pd.hugene.1.0.st.v1
Epigenetics Annotation oligo Epigenetics Annotation oligo
updated 14.8 years ago by ★ 4.3k • written 14.8 years ago by ★ 1.1k
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error in RnBeads installation
Epigenetics RnBeads R
2.2 years ago Jitendra ▴ 10
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job: head of core facility bioinformatics (Mainz/Germany)
Epigenetics Infrastructure Epigenetics Infrastructure
10.4 years ago Holger Klein ▴ 20
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qPCR Events and 30% Discount on qPCR workshops
miRNA qPCR Epigenetics GO Visualization Network probe microRNA miRNA qPCR Epigenetics
14.6 years ago qPCR Platform - the reference in real-t… ▴ 170
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4 PhD positions in cancer computational biology
Sequencing Epigenetics Cancer Sequencing Epigenetics Cancer
12.7 years ago mattia pelizzola ▴ 200
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Beyond dmpFinder for methylation analysis, using limma for covariates
minfiDataEPIC arrays limma minfi Epigenetics
updated 3.5 years ago by 50k • written 3.5 years ago by ▴ 20
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Bioinformatics Positions, National Cancer Centre Singapore
Microarray Epigenetics Cancer Microarray Epigenetics Cancer
16.1 years ago Julian Lee ▴ 140
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Job: Post-doc Position in Epigenetic Bioinformatics
cancer sequencing epigenetics computational biology bioinformatics Job
8.5 years ago Yassen Assenov ▴ 10
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Epigenetic clock (Horvath): package?
methylation illimina 450k methylation epigenetics minfi
updated 7.2 years ago by ▴ 60 • written 7.3 years ago by ▴ 120
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Post-doc position in Paris
Sequencing Epigenetics Cancer Breast DECIPHER Sequencing Epigenetics Cancer Breast
14.9 years ago Joern Toedling ▴ 450
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Senior Bioinformatics Research Scientist Position at Garvan Institute, Australia
Epigenetics Bayesian Cancer Breast Epigenetics Bayesian Cancer Breast
16.4 years ago Jean Yee Hwa Yang ▴ 130
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ChAMP: Error using champ.norm() function
ChAMP methylation epigenetics
8.6 years ago jdangelo • 0
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News: Plotly uprading issue in ChAMP package
ChAMP Epigenetics plotly Shiny GUI News
7.6 years ago • updated 7.4 years ago Yuan Tian ▴ 90
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Job: Bioinformatics Analyst at Johns Hopkins Medical School (Masters or Ph.D.)
Sequencing Epigenetics PROcess Sequencing Epigenetics PROcess
10.1 years ago Brian Herb ▴ 80
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[job] Postdoc position on the bioinfomatics of epigenetic circuits in genome programming and reprogramming at the European Institute of Oncology in M…
RNASeq ChIPSeq Epigenetics Cancer chipseq SANTA RNASeq ChIPSeq Epigenetics Cancer SANTA
12.7 years ago stefano iacus ▴ 430
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IS PROGRAMMER/ANALYST I / 40 HOUR / DAY / BWH - CHANNING LABORATORY
Epigenetics Annotation Network Epigenetics Annotation Network
12.3 years ago Guest User ★ 13k
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News: ChAMP2 is online
epigenetics EPIC 450K ChAMP News
7.6 years ago Yuan Tian ▴ 90
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[Course] CSAMA 2013: Computational Statistics for Genome Biology (11th edition) Brixen, Italy, June 24-28th 2013
Sequencing Epigenetics Cancer Sequencing Epigenetics Cancer
11.3 years ago stefano iacus ▴ 430
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Position Assistant Professor Bioinformatics
Epigenetics Epigenetics
12.7 years ago Martin Zenke ▴ 10
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how to install gnGNF1a cdf and probe files to a recent version of R (2.13.1)?
Epigenetics cdf Epigenetics cdf
updated 12.5 years ago by 65k • written 12.5 years ago by ▴ 30
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regression analysis for epic array methylation data using limma
limma Epigenetics STATISTICS R
24 months ago Jitendra ▴ 10
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Bioinformatics positions
Microarray Genetics Proteomics Epigenetics Microarray Genetics Proteomics Epigenetics
16.5 years ago French, Jef NIH/NIEHS ▴ 30
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Create affyBatch from mouse exon array data using ReadAffy or extractAffyBatch() from aroma.affymetrix
Epigenetics Cancer probe affy xps Epigenetics Cancer probe affy xps
15.9 years ago Martin Morgan 25k
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Head of Junior Research Group - Bioinformatics
Epigenetics Epigenetics
12.8 years ago Qiong Lin ▴ 10
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Prokaryotic_Rhodobacter capsulatus GEP
Epigenetics cdf affy makecdfenv plier affxparser preprocessCore Epigenetics cdf affy
updated 15.5 years ago by ▴ 140 • written 15.5 years ago by 65k
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sd==0 for some probesets when using gcrma
Microarray Proteomics Epigenetics Normalization GO Cancer hgu95av2 affy graph gcrma GO
15.4 years ago Dick Beyer ★ 1.4k
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Bioinformatics postdoc in Brussels
Sequencing Epigenetics Cancer Breast Sequencing Epigenetics Cancer Breast
15.2 years ago Vincent Detours ▴ 80
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Fwd: biomaRt column order
Epigenetics biomaRt Epigenetics biomaRt
15.9 years ago steffen@stat.Berkeley.EDU ▴ 600
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Job: PhD computational position - Milan
epigenetics transcription computational biology Job
6.8 years ago mattia pelizzola ▴ 200
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browseGenome width question (rtracklayer)
Epigenetics GO hgu95av2 GLAD rtracklayer Epigenetics GO hgu95av2 GLAD rtracklayer
15.3 years ago Michael Lawrence ▴ 620
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Beta values and M values cluster differently
methylationEPIC minfi microarray epigenetics EPIC
5.2 years ago rmf ▴ 20
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batch effect in EPIC array data
statistics Epigenetics R
updated 15 months ago by ▴ 730 • written 15 months ago by ▴ 10
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Job: Computational Biology & Bioinformatics Postdoctoral Research Associate / Research Assistant (Fixed Term) in (Epi)Genomic Regulation of Cancer @ Unive…
cancer computational biology bioinformatics epigenetics Job
4.2 years ago Shamith.Samarajiwa ▴ 180
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[ Re: Fwd: biomaRt column order]
Epigenetics biomaRt Epigenetics biomaRt
15.9 years ago steffen@stat.Berkeley.EDU ▴ 600
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DMRcate design
Epigenetics EpigeneticsWorkflow DMRcate
8 months ago • updated 7 months ago Jitendra ▴ 10
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Job: Postdoctoral Fellow in Epigenomcis/Neurobiology (MGH/Harvard Medical School, Boston)
GenomicVariation SingleCell Autism Neurogenesis Epigenetics
19 months ago sudhir.thakurela • 0
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Best normalisation method
microarray methylationEPIC epigenetics minfi EPIC
5.2 years ago rmf ▴ 20
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Job: Bioinformatics Research Scientist- Epigenetics Group
HiC Epigenetics HiCHIP ChIPSeq
23 months ago xubeisi • 0
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filtering options in RnBeads for array data
Epigenetics RnBeads MethylationArrayData methylationArrayAnalysis
2.1 years ago Jitendra ▴ 10
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Job: EPA Postdoctoral Fellowship in Bioinformatics and Computational Toxicology
MethylSeq Transcriptomics Pathways Epigenetics RNASeq
18 months ago whduke • 0
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error while running DMRcate
stattistics epicarray Epigenetics DMRcate
updated 6 months ago by 65k • written 6 months ago by ▴ 10
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How to find regulatory region position and associated genes for CpG sites
Epigenetics R Bioconducter
14 months ago Jitendra ▴ 10
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normalisation options in RnBeads
Epigenetics RnBeads R Bioconducter
2.1 years ago Jitendra ▴ 10
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combat for batch effect correction in EPIC array data
Epigenetics combat EPIC
14 months ago Jitendra ▴ 10
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rnbeads inference
epigenetics RnBeads
15 months ago Jitendra ▴ 10
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limma with interaction term
R biostatistics limma Epigenetics
3 months ago • updated 12 weeks ago Jitendra ▴ 10
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Further analysis after limma regression output
statistics Epigenetics limma
updated 8 months ago by 65k • written 8 months ago by ▴ 10
49 results • Page 1 of 1
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Comment: DESeq2- Mysterious interaction suppresses DEGs by Michael Love 42k
We have some text about this particular question in the Frequently Asked Questions (FAQ) part of the software vignette.
Answer: How to run allelic imbalance in apeglm by Michael Love 42k
You can put 1 / 1 for the ratio when you are missing counts and then set the weight for that matrix cell to 1e-6. Let me know if that's …
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0
Got you. Thanks again for your comments.
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
Thanks so much for your comment. Yes, this makes sense to me, especially since the effect of the drug is subtle. But it raises a larger con…
Answer: ERROR; return code from pthread_create() is 22 by James W. MacDonald 65k
Seems OK to me. ``` > dat <- ReadAffy() > dat AffyBatch object size of arrays=744x744 features (20 kb) cdf=HG-U219 (49386 affyids) …
Votes
Comment: DESeq2- Mysterious interaction suppresses DEGs
Answer: DESeq2- Mysterious interaction suppresses DEGs
Answer: Subsetting RNAseq data | voomaByGroup()
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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