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HTSeq
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0
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2
replies
581
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DEXSeqDataSet object DEXSeqDataSetFromHTSeq Error: line number did not have 3 elements
DEXSeq
HTSeq
R
9 months ago • updated 8 months ago
yr542
• 0
1
vote
6
replies
1.0k
views
low counts from microRNA seq
DESeq2
microRNA
HTSeq
17 months ago • updated 16 months ago
abhay.kanodia
• 0
0
votes
1
reply
735
views
Error in DESeqDataSetFromHTSeqCount
DESeq2
RNA-seq
HTseq
DESeqDataSetFromHTSeqCount
updated 17 months ago by
Michael Love
42k • written 18 months ago by
abhay.kanodia
• 0
0
votes
2
replies
729
views
RNA-Seq Reads Count
DESeq2
htseq
DEGseq
RNASeq
read
updated 18 months ago by
Michael Love
42k • written 18 months ago by
CP
• 0
0
votes
2
replies
1.1k
views
Problems while installing HTSeqGenie and gmapR
software error
HTSeq
installation
updated 4.2 years ago by
Martin Morgan
25k • written 4.2 years ago by
eric33150
• 0
12
votes
4
replies
4.5k
views
differential expression analysis of htseq data with edgeR/voom
voom
htseq
edgeR
limma
RNASeq123
updated 5.4 years ago by
Gordon Smyth
50k • written 6.9 years ago by
wd
▴ 30
0
votes
1
reply
1.5k
views
counting with htseq script in DEXSeq
DEXSeq
dexseq_count
htseq
7.2 years ago
mat.lesche
▴ 90
1
vote
6
replies
1.9k
views
Error: could not find function "HTSeqCounts"
HTSeq
HTSeqCounts
Could not find function
DEXSeq
updated 8.1 years ago by
Martin Morgan
25k • written 8.1 years ago by
sakura.nussbaum
▴ 10
8 results • Page
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Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…
Comment: European Bioconductor Conference 2023 planning
by
angelaesper43
• 0
@Maria Doyle[sexdolltech][1]Hosting EuroBioC provides an excellent opportunity to showcase Bioconductor and computational biology research …
Comment: Ensembl plants at annotationHub?
by
Johannes Rainer
★ 2.0k
Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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